Gene Nther_2642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2642 
Symbol 
ID6316645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2839799 
End bp2840731 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content42% 
IMG OID642645020 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001918785 
Protein GI188587240 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGAAC CAAAACAAGT CCAAAAACAG GGACAAACCC AAAACCAAGA CCAAACTGCT 
GTTGACAAGC CATCCAGCAT TTTGGGTGAT GGCATCCGTC AATTCGCAAA AAATAAATTG
GCTGTTATCA GCTTTGGAGT CGTTATTTTA TTTATTCTTA TGGGTATATT TGCACCACAT
ATTGCACCTT CTAATGAGGA TCCTATAGAA CCTGTTTTAC AGAGACGTCT TCAACCTGGA
ATTTGGGAGG GTAATTCCGA GACCCCCCTA GGGACCGATT CTTTGGGTAG AGATATCTTG
ACCCGCTTAA TATACGGTGC CCAAATTTCT TTAAGAGTAG GTTATGTAGT AATTGGTATT
ACTGCCGTTT TCGGAATTAC TATTGGCTTA ATCGCCGGTT ATTTTGGAGG AAAAATAGAT
ATGATATTTA TGCGATTCAT CGATATCATG TTATCTTTTC CACCTCTACT ACTCGCCTTA
GTAGTTGTAG CGATTCTGGG GGCAGGTTTG GAAAATGCCA TGCTGGCAAT AGCCCTGGTT
TATATTCCTC AGGTCGCCCG AGTTGTCAGA AGTTCTGTAT TAAAAGTAAG AGAAATGCCA
TACATTGAAG CTTGTAGAGC TATGGGGGGT TCAAATTTTT GGATTATAAT TTCCCATGTT
TTACCCAATA TACTGGCTTC TGCCGTGGTT TATTTAACTC TGTTACTGGG TGATGCAATC
CTTTACACGG CTGCTTTAGG ATTTCTCGGA ATTGGAATAG ATCCGGCAAC TCCCGAATGG
GGGGCTATGT TAAGTGATGG CAGAGATTAC TTACTGGTAG GTGGTTGGTG GGTAACTCTT
TTCCCTGGAG TTATGATCGC CCTTACTGTA TTGTCATTCA ACCTTTTTGG AGACGGCTTA
CGGGAAGCTT TTGACCCCAA AATGGACCTG TAA
 
Protein sequence
MEEPKQVQKQ GQTQNQDQTA VDKPSSILGD GIRQFAKNKL AVISFGVVIL FILMGIFAPH 
IAPSNEDPIE PVLQRRLQPG IWEGNSETPL GTDSLGRDIL TRLIYGAQIS LRVGYVVIGI
TAVFGITIGL IAGYFGGKID MIFMRFIDIM LSFPPLLLAL VVVAILGAGL ENAMLAIALV
YIPQVARVVR SSVLKVREMP YIEACRAMGG SNFWIIISHV LPNILASAVV YLTLLLGDAI
LYTAALGFLG IGIDPATPEW GAMLSDGRDY LLVGGWWVTL FPGVMIALTV LSFNLFGDGL
REAFDPKMDL