Gene Nther_2530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2530 
Symbol 
ID6315453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2724172 
End bp2725191 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content30% 
IMG OID642644913 
Productglycosyl hydrolase BNR repeat-containing protein 
Protein accessionYP_001918678 
Protein GI188587133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.000031693 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAACATAG AACCAGCAAG AAAATTTAGT GGAAGAGTTC ATTTCGTCAA TGACTCTGTA 
TTAATAGCAA CGAAAGCCAA TAATGTGTAC ATCAGTAAAG ATGATGGCCA GAACTGGAAA
AAAATACTAA ATTTACAATT AAATTTTAAA GATAGATTTA AAATAAAAAA TCGGTGGAGT
AGAAGATTAT TTAGGTGTGA CATCCATCAT TTATTGAAAA TAGATGATCA CATAATTTTG
TTTTTAAAGA ACGAAATATA TGTTTTTGAT ATTATTGATA TGCGCGTTTT AACAAGACAA
AGTCTACCTG GACGAGGAAG CAGACCTTTA AAAGTTTGTT TATCAAATGG TAATTTATAT
TATGGCGAAT ACTTTGGAAA TAAGTATAGA GACCCAGTTA GAGTTTATAA AAGCACAGAT
TTTGGTAAAA CATGGGAAGT TACTTACGTA TTTAATAATA TCAGACATAT CCATGGTATA
TTTGAAGACC CTTATACTGG TAATATTTGG GTAACTACTG GAGATAGTGG TGATGAAGCG
GCTATTTGGG TCACAAATAA TGATTTTAAA GATGTACAAC CAGTCTTAAA AGGTGGTCAG
CAGTTTAGAG CGGTCACATT ATTATTTACA CAAGATTATA TTTATTATGG TACGGATACA
CCATTAGAGG ACAATTATAT TTACCGATTA GATAAAAAAG ATTATAATTT AGAAAAGTTA
GTAAAAGTGG ATAGTTCAGT TTTTCATGGG ACGGTTGTAA ATAATAATTT GTTTTTTTCT
ACAGCATGCG AACCAAGTGA AGTTAATGAA ACTCGTAAGG TTAAAGTTTG GATGAGTAGA
GATGGGGAAA ATTGGGAAGT GATCAAAACT TTTAAGAAAG ACATTTTATC ATACAAGTAC
TTTCAATATG GACAAGTTTT TTTCCCCTAT AATGCTAAAA GAAAAAATGA CAATCAACTG
TGGATCACAC CTTTTGCGAC TAATTATGAT CAAGTTAGCT TTAAATATTA TTTAAAATAA
 
Protein sequence
MNIEPARKFS GRVHFVNDSV LIATKANNVY ISKDDGQNWK KILNLQLNFK DRFKIKNRWS 
RRLFRCDIHH LLKIDDHIIL FLKNEIYVFD IIDMRVLTRQ SLPGRGSRPL KVCLSNGNLY
YGEYFGNKYR DPVRVYKSTD FGKTWEVTYV FNNIRHIHGI FEDPYTGNIW VTTGDSGDEA
AIWVTNNDFK DVQPVLKGGQ QFRAVTLLFT QDYIYYGTDT PLEDNYIYRL DKKDYNLEKL
VKVDSSVFHG TVVNNNLFFS TACEPSEVNE TRKVKVWMSR DGENWEVIKT FKKDILSYKY
FQYGQVFFPY NAKRKNDNQL WITPFATNYD QVSFKYYLK