Gene Nther_2317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2317 
Symbol 
ID6315794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2465397 
End bp2466575 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content39% 
IMG OID642644704 
Productresponse regulator receiver protein 
Protein accessionYP_001918470 
Protein GI188586925 
COG category[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
[COG4963] Flp pilus assembly protein, ATPase CpaE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.594065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones92 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTA AGATAGATAT TTTAATAGCC GATGATATTT CAGAAACCAG AGAAAATATC 
AAGCGATTTT TAGGATTTGA GCGGGATATT CAAATAGTGG GAGAAGCAGC CAATGGCGAA
CAGGCTATTA GCATGGCGGA AAAGATGAAA CCGGACATAA TCCTAATAGA TATTAATATG
CCTTTAGTTG ACGGTATTAG CGCAATCGAA AGTTTGTCAT TAAAAGCCCC TCAGGTAGCC
CCTATAGTTA TATCTGTACA AGGTGAGGCA GAATACTTTA AAAAAGCCAT GAGGGCTGGA
GCGAGAGATT ACCTGGTGAA ACCATTTTCC GGAGATGAAT TGATTTCTAC AATTAAGGAA
GTTGTTCAAA AAGAAGAGGA AGTCAGAGAA AAACAAATGA ATGAAGCTCT ACTTAGGTCA
GGAATCAAGC ACAAGCCCAG GATTTTTTCT GTATTTAGTG CAAAAGGTGG GACCGGGAAA
ACTACTTTAG CGGCAAATTT AGCCAGCTGC TTATCCAAAT TTCATGATAA AAAGACTGTT
ATAGTTGATT TGGACCTGCA GTTTGGCGAT ATTCCCATAA TGTTCAATAT CACCCCACAA
CAGACTATCA CAGATCTGCT TTCCAATATT AATGAACTGG ATAGTGAAAC CCTGGAGAAT
GTCTTAATTC ATCACGAGGA AACGGGTGTT AAGCTTTTGT GCCCACCTAA AAACCCTGAA
GAAGCAGAAT ATGTATCTGA TGAACACGTG GAAGAAATCC TGAGAGTGTT GACGGAAACT
TATGAATATA TTTTAGTTGA TACGCCACCA GCTTTTTCGG GGCATGTTTT ATCGGCACTA
GATCAGTCCC ATAAGATATT TTTGGTTACT ACTCTGGATT TACCCTCAAT AAAAAATGCA
AAAAACTCAA TTAATATAAT GGACAACCTG GGCTATCCTG AAGACAAAGT TAACCTTGTA
GTCAATAAAG AGGATAAGTA CTATCAGGTG GGGAAGCAAG ACTTACAGGA CGCACTGAAT
CGGGGTATAT TTTATCGCAT GCCTAATAAA GAAAAACCCA TTGTAGAGGC TATTAACAGG
GGCGTGCCCG TAATTTTAGA GCCTTCTGTC AATGGTGTAG TAAGTGAATT CAGGAAGTTT
TCCAATAAGG TTATTGAACA TGAAAAAAGG GTTGAATAA
 
Protein sequence
MKRKIDILIA DDISETRENI KRFLGFERDI QIVGEAANGE QAISMAEKMK PDIILIDINM 
PLVDGISAIE SLSLKAPQVA PIVISVQGEA EYFKKAMRAG ARDYLVKPFS GDELISTIKE
VVQKEEEVRE KQMNEALLRS GIKHKPRIFS VFSAKGGTGK TTLAANLASC LSKFHDKKTV
IVDLDLQFGD IPIMFNITPQ QTITDLLSNI NELDSETLEN VLIHHEETGV KLLCPPKNPE
EAEYVSDEHV EEILRVLTET YEYILVDTPP AFSGHVLSAL DQSHKIFLVT TLDLPSIKNA
KNSINIMDNL GYPEDKVNLV VNKEDKYYQV GKQDLQDALN RGIFYRMPNK EKPIVEAINR
GVPVILEPSV NGVVSEFRKF SNKVIEHEKR VE