Gene Nther_2248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2248 
Symbol 
ID6316994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2385400 
End bp2386056 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content36% 
IMG OID642644636 
Productbutyryl-CoA:acetoacetate CoA-transferase alpha subunit 
Protein accessionYP_001918402 
Protein GI188586857 
COG category[I] Lipid transport and metabolism 
COG ID[COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 
TIGRFAM ID[TIGR02429] 3-oxoacid CoA-transferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAA TTTTAAGTGC TAAAGAGAGT GTTGAAAAGA TATTTGATGG TATGACAGTT 
ATGATAGGAG GTTTTCTTGC GACAGGTACT CCAGAAACAT TAGTCGATGC ACTAGAGGAT
AAAGGTGTTA AGGATTTAAC ATTAATTGCA AACGATACCA GTTATCCAGA GAAAGGGATT
GGGCGTTTAG TTGTAAATGA TCAATTTTCA AAAGTTTTCG TTTCCCACAT TGGTACAAAC
AAATATACAG GAGAAAAAAT GCATAACGAT GAACTGGATG TAAACCTAGT ACCTCAAGGA
ACTTTGGCAG AACAAATCAG AGCAGGTGGA GCAGGTTTAG GAGGAATATT AACTCCTACA
GGTATCGGTA CTGTAGCAGA AGAAGGAAAA CAAAAAATAA AAATAAATAG AAAAGACTAC
ATTTTAGCCG AATCTTTAAC AGCAGATGTA GCGTTAATTA AAGCTGAACA AGCTGATGAA
TTTGGTAATT TAAGATATCG TCTTTCTGCT CGTAATTTCA ACCCACTTAT GGCAAAAGCA
GCAAAAATAG TTATAGCAGA AGTAGGAAGT ATAGAACCGG CATCATCCTT TGACCCAGAT
GATATTCATA CTCCTAGCGT ATATGTAGAT TATTTAGTAA AAAGAGAGGA GGGGTAA
 
Protein sequence
MKQILSAKES VEKIFDGMTV MIGGFLATGT PETLVDALED KGVKDLTLIA NDTSYPEKGI 
GRLVVNDQFS KVFVSHIGTN KYTGEKMHND ELDVNLVPQG TLAEQIRAGG AGLGGILTPT
GIGTVAEEGK QKIKINRKDY ILAESLTADV ALIKAEQADE FGNLRYRLSA RNFNPLMAKA
AKIVIAEVGS IEPASSFDPD DIHTPSVYVD YLVKREEG