Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1924 |
Symbol | |
ID | 6315825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2022357 |
End bp | 2023109 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642644306 |
Product | two component transcriptional regulator, LytTR family |
Protein accession | YP_001918083 |
Protein GI | 188586538 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGGTG TGGTTGTTTT AATTTTAGAA GATGAACCTT ATACCAAAAA ATATGTCAAA AACTTGGTTT CTCAAAATAA AATGGTTAAA GAAATTTATG ACACAGAAAG CTCTAGAGAG GCTGTCGAAA TGGCGGAAAA AGTGCAGCCT GATATTGCTT TAATTGACAT TGAGTTGACG GATCAAAGAA TGAACGGCTT AGAGACTGCA CAATTAATCA AACAAGTCAA TCCGGAAATA GAATTTATAT TTGTTACAGC TTATTCTGAA TACGCTTTGC AGTCTTTCTC TGTACATCCC TTTGATTACC TGGTTAAACC AATTGATGAG GATAAGCTAT TAAATTCGAT TAAGATGCTT ATAGAGCGAT TAAATTTAAA TAGGAATGGT AGTGAATCTA ACAAAGAAGC TAATGCACGT TTAATAATTG AAGAACCTAA GAAGATGTTG TTTATTCCTC TTGAAAATAT TCTATTTTTG GAAAAACAAA AAAACAAAAA TCAAGTGTTG ATTCACATAC AAGATGGGAA AATTTATGAA ACGACTAAGA GATTAAGTGA CTTAGAAGAA GAATTGACGG ATAGCTTTGT CAGAACACAC AGATCGTATA TTGTTAATGT AAATAAAGTA CTTAAGGTTA TGGAGATTTA CGATCGATCT TATGAGATAG AGTTTAGAGA AAGTAACAAA AAAGCTCTTT TAAGTCGATA TAAGCTAGAA GAATTTCAAG AACAAGTAGC AATAGACTCC TAG
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Protein sequence | MGGVVVLILE DEPYTKKYVK NLVSQNKMVK EIYDTESSRE AVEMAEKVQP DIALIDIELT DQRMNGLETA QLIKQVNPEI EFIFVTAYSE YALQSFSVHP FDYLVKPIDE DKLLNSIKML IERLNLNRNG SESNKEANAR LIIEEPKKML FIPLENILFL EKQKNKNQVL IHIQDGKIYE TTKRLSDLEE ELTDSFVRTH RSYIVNVNKV LKVMEIYDRS YEIEFRESNK KALLSRYKLE EFQEQVAIDS
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