Gene Nther_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1924 
Symbol 
ID6315825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2022357 
End bp2023109 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content32% 
IMG OID642644306 
Producttwo component transcriptional regulator, LytTR family 
Protein accessionYP_001918083 
Protein GI188586538 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGGTG TGGTTGTTTT AATTTTAGAA GATGAACCTT ATACCAAAAA ATATGTCAAA 
AACTTGGTTT CTCAAAATAA AATGGTTAAA GAAATTTATG ACACAGAAAG CTCTAGAGAG
GCTGTCGAAA TGGCGGAAAA AGTGCAGCCT GATATTGCTT TAATTGACAT TGAGTTGACG
GATCAAAGAA TGAACGGCTT AGAGACTGCA CAATTAATCA AACAAGTCAA TCCGGAAATA
GAATTTATAT TTGTTACAGC TTATTCTGAA TACGCTTTGC AGTCTTTCTC TGTACATCCC
TTTGATTACC TGGTTAAACC AATTGATGAG GATAAGCTAT TAAATTCGAT TAAGATGCTT
ATAGAGCGAT TAAATTTAAA TAGGAATGGT AGTGAATCTA ACAAAGAAGC TAATGCACGT
TTAATAATTG AAGAACCTAA GAAGATGTTG TTTATTCCTC TTGAAAATAT TCTATTTTTG
GAAAAACAAA AAAACAAAAA TCAAGTGTTG ATTCACATAC AAGATGGGAA AATTTATGAA
ACGACTAAGA GATTAAGTGA CTTAGAAGAA GAATTGACGG ATAGCTTTGT CAGAACACAC
AGATCGTATA TTGTTAATGT AAATAAAGTA CTTAAGGTTA TGGAGATTTA CGATCGATCT
TATGAGATAG AGTTTAGAGA AAGTAACAAA AAAGCTCTTT TAAGTCGATA TAAGCTAGAA
GAATTTCAAG AACAAGTAGC AATAGACTCC TAG
 
Protein sequence
MGGVVVLILE DEPYTKKYVK NLVSQNKMVK EIYDTESSRE AVEMAEKVQP DIALIDIELT 
DQRMNGLETA QLIKQVNPEI EFIFVTAYSE YALQSFSVHP FDYLVKPIDE DKLLNSIKML
IERLNLNRNG SESNKEANAR LIIEEPKKML FIPLENILFL EKQKNKNQVL IHIQDGKIYE
TTKRLSDLEE ELTDSFVRTH RSYIVNVNKV LKVMEIYDRS YEIEFRESNK KALLSRYKLE
EFQEQVAIDS