| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1850 |
|---|
| Symbol | |
|---|
| ID | 6315286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1930031 |
|---|
| End bp | 1931674 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 642644228 |
|---|
| Product | Dihydroxy-acid dehydratase |
|---|
| Protein accession | YP_001918010 |
|---|
| Protein GI | 188586465 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
|---|
| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.0203802 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAA AGTTTGTCGG TACTGATGCG ATTATGAGAC GAGCTATGCT CAAAGGTTGT
GGATTCGGTG ATGATGATAT CAAAACCAAA CCGCATATTG GGATAGTAAA CACTTACAAC
GAAGGTGCTC CTGGACACGC CCATCTCAAA CAATTATCCG AAGTAATCAA ACAAGGAGTT
TGGGCTGCAG GGGGCGTTCC CTTTGAGTTT GGAGCTCCCT CTACATGTGG AGATATGATC
GTAGGTGAAG AAGAATTAAA ATTTGAACTT GCAGGCAGAG ATGTAGTCGC CCAGGCTGTC
GAGTATGTTT CAACTGTACA TCAGTTTGAT GGGCTTATAT TACTGGCAAG CTGTGATAAT
ATTATCCCCG GTGTTGCTCT AGGAGCTATT AGAATGAACA TCCCCTCTAT CATTTTAACC
GGAGGTTCTA TGCTGGTCGG TGAATACCAA GGAGAGGAAA TTCTGCCCTG CGATGTAGGT
GTTATGACTA TGGGTAAAGA TGCGGAAAGT GAACGGGTCA AAGAGATTGA AAATGTTGCT
TGTATGTGCC CTGGAGCTTG TTCCACCATG GGAACGGCAA ATAGTATGCA AATTATGATG
GAAGTACTAG GTTTAACATT ACCCGGTGTC TCAACAATCC CTGCTGTTTA TGCTGACAAA
CAGAGGGCTT CACGCCTAGC AGGAAAAAGA ATAGTAGATA TGGTCAAGGA AGATTTAAAG
CCAAGTAATG TTTTAACAAG AGAAACCTTT TTAAATGCAG TAACAACAGA TATTGCCATG
GGTGGTTCTA CTAATGTCAT CCTGCATTTA ATTGCCCTTG CAAGAGAAGC AGGAGTAGAA
TTAACGGTTG ATGATTTTGA TAGAATTGGC CGAAATGTAC CTTGTGTTTG TGGTGTAAAA
CCATCAGGCG ATTATACAAT AGTAGATTTT CATAACGCCG GTGGTGTGCC CGCTATGTTA
AAAGAACTAC AATCTTTACT CTATTTAGAT TCAAAAGCTA TTACCGGAGA AACATTACAA
GAAATCATCA ATAAAGCAAG CAATAAAAAT CCCGATGTCA TTAGATCTAT GGACAATCCT
ATCACTTCAG ATGGTGGTCT AACTATCTTA AGAGGTAATC TAGCACCTAA CAGTGCTATT
ATCAGATCTT CTTCTGTCCC TGAAAGCATG AAGAAGTTTT CGGGCCGAGC CAGGGTATTT
CATAGAGATC AGGACGGTGC TAAGGCCATT AAAGAAGGCA AAATTCAACC AGGAGATGTT
ATGGTTATTC GGTACGAGGG ACCGAAAGGT GCCCCAGGAA TGAAAGAAAT AATGTTGAGT
ACCGATGCTC TAGTAGCTCA TGGGCTCGAC GATAGTGTCG GACTTGTGAC AGACGGTAGA
TTTTCCGGAT TTAACCGCGG CCCCATAGTA GGCCATATAA CCCCTGAAGC TTTTGAAGGC
GGCCCTCTGG CCTTGGTAGA AGATGGTGAT ATCATCTCAG TAGATATTAA AGAAGCTACC
CTTACTATTG ACATCAGTGA AGAAGAAATG AAACGACGAG GAGCTAACTG GCAACAACCA
GAACCGAAAG TAAAACAAGG AATGATGCGA CTATACTCCA AGATGTGCAG ATCTGCTGAA
GAAGGAGCAG GTATGACATT ATAA
|
|---|
| Protein sequence | MNEKFVGTDA IMRRAMLKGC GFGDDDIKTK PHIGIVNTYN EGAPGHAHLK QLSEVIKQGV
WAAGGVPFEF GAPSTCGDMI VGEEELKFEL AGRDVVAQAV EYVSTVHQFD GLILLASCDN
IIPGVALGAI RMNIPSIILT GGSMLVGEYQ GEEILPCDVG VMTMGKDAES ERVKEIENVA
CMCPGACSTM GTANSMQIMM EVLGLTLPGV STIPAVYADK QRASRLAGKR IVDMVKEDLK
PSNVLTRETF LNAVTTDIAM GGSTNVILHL IALAREAGVE LTVDDFDRIG RNVPCVCGVK
PSGDYTIVDF HNAGGVPAML KELQSLLYLD SKAITGETLQ EIINKASNKN PDVIRSMDNP
ITSDGGLTIL RGNLAPNSAI IRSSSVPESM KKFSGRARVF HRDQDGAKAI KEGKIQPGDV
MVIRYEGPKG APGMKEIMLS TDALVAHGLD DSVGLVTDGR FSGFNRGPIV GHITPEAFEG
GPLALVEDGD IISVDIKEAT LTIDISEEEM KRRGANWQQP EPKVKQGMMR LYSKMCRSAE
EGAGMTL
|
|---|
| |