Gene Nther_1671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1671 
Symbol 
ID6315318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1747589 
End bp1748227 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content29% 
IMG OID642644047 
Productstage II sporulation protein M 
Protein accessionYP_001917833 
Protein GI188586288 
COG category[S] Function unknown 
COG ID[COG1300] Uncharacterized membrane protein 
TIGRFAM ID[TIGR02831] stage II sporulation protein M 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.264112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00696283 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAAATT CAATTAAAGA GATACTATCT CTTTATATTA AGTATAACTT TATCTTGTTC 
TTAATCGTGT TATTATTGTT TTTAGCAGGA ACAGCAACAG GGGTTGTCAC AGTAAATCAT
ATTCCGCAAG AACAAACTTC TGAACTCGAG GCTTATCTGG ACAACTTTTA TCAATTTGTG
TCAAATCAAA ATTCTTTAGA ATATTATCAT GTATTTTTAT CAAGTCTAAG CTATAACATG
ACATTATTAG GTATACTATG GTTGCTTGGA ATTACCATGG TAGGTATACC CATCATAATG
ATTTTGGTTT TCTTAAGAGG TATTGCCTTT GGTTTTACTA TTGGTTTCTT AATTGAAAAA
ACCTCTTTCA TGGGTGCTTT ATTGGCATTA GTTTCGATTT TGCCACATAA TGTCCTATTT
GTGCCTTGTT TTTTCATTAT TTCTGTTGCT GGGATTTCAT TTTCTATTTT GTTAATTAGA
AATCAACTTG GGAAAAAGTC TATTTCTATT ATTCCTGAAT TAATAAATTA TACTTTATTA
TTTGTCATTA TAGGAGTAGG TTTTGTAGCC GGTTCACTGA TTGAAGCTTA TATAAGTCCA
ACATTTATGA GAATATTACT ACAGTATGTT CAATTTTAG
 
Protein sequence
MLNSIKEILS LYIKYNFILF LIVLLLFLAG TATGVVTVNH IPQEQTSELE AYLDNFYQFV 
SNQNSLEYYH VFLSSLSYNM TLLGILWLLG ITMVGIPIIM ILVFLRGIAF GFTIGFLIEK
TSFMGALLAL VSILPHNVLF VPCFFIISVA GISFSILLIR NQLGKKSISI IPELINYTLL
FVIIGVGFVA GSLIEAYISP TFMRILLQYV QF