| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1622 |
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| Symbol | |
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| ID | 6314769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 1700700 |
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| End bp | 1701911 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642643998 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_001917784 |
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| Protein GI | 188586239 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000303127 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0000000924799 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTGACAA AAACGCAAAT CGAAGTGAAC AATGTTTACA AAATTTTTGG ACCAAGACCA
GATCGAGTCT TTCCACTACT TGAAAAAGGT ATGACCAAAG ATGAAATTTT AAGAAAAACA
GGAAACACTG TCGGAGTAAA CGATGCAAGC TTTGATGTTA AAGAAGGCGA AATCTTTGTA
ATCATGGGTT TATCTGGTAG TGGCAAGTCA ACACTTATTA GGTGTATTAA TCGACTCATT
GAACCAACTA GAGGCGAAGT CCTGATCGGT GGAGAAGATA TTTTACAGAT GGATAATGAA
AAACTTAGAC AAGTAAGACG TGCCAAACTT GGCATGGTAT TTCAGCACTT CGCTTTGTTT
CCTCACAGAA CTGTACTTGA TAATGTTACC TACGGTTTAG AAGTTCAAAA TGTTGATCAA
GAAAAACGCC AAGAAGTAGG CATGAAGGCA TTAGATCAAG TTGGCTTAAA AGATTATGCA
AAATCAAAAC CAAGCGGCTT GAGTGGTGGA ATGCAACAGC GTGTCGGCCT TGCCAGGGCA
TTAGCATTAG ATCCAGACAT TTTACTAATG GATGAACCAT TTAGTGCCTT AGACCCGCTG
ATTAGGCGCG ATATGCAGAG TGAATTGTTA GAATTACAAT CAAGAGTTAA TAAAACAATT
TTATTCATTA CACACGACTT GGACGAGGCT TTGAAACTAG GGGACAGAAT CGCTATCATG
AGAGATGGCG TTATAGTGCA AATTGGTGAG CCAGAAGAAA TTCTTTCAAA TCCTGCTAAT
GAGTATGTAG AAAACTTTGT CAGAGATGTT AACAGACTAA AAATACTTAC TGCAGGAAGT
ATAATGGAGA AACCTGATGT AACAGTAAAT ATCAGCGACG GTCCTAGAAA AGTTCTTCGA
GTATTGGAAA AAGAAGGTTT CTCCAATGCT TATGTTGTAG ATCGTCAAAA ACGAGTTAAA
GGTGTAATTA AAGATACTGG AGCTTTAGAG GCTCTAAAAA ACAATGAAAA AACAATTGAA
AACTATCTGA TCACTGATTA TCCATCAACA TCAGAAGATA CTCCACTTAA TGAACTGTTA
CAAACAGCTT CGGAGTCAGA CTACCCTATA GCAGTCGTAG ATGAAGAAGA TAAATTGCAA
GGGCTGATTG TCAGGGTATC AGTTCTGGCC TCATTAGCTG AAGGAGAAGG AAGTGATAAC
GATGATTCCT AG
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| Protein sequence | MVTKTQIEVN NVYKIFGPRP DRVFPLLEKG MTKDEILRKT GNTVGVNDAS FDVKEGEIFV
IMGLSGSGKS TLIRCINRLI EPTRGEVLIG GEDILQMDNE KLRQVRRAKL GMVFQHFALF
PHRTVLDNVT YGLEVQNVDQ EKRQEVGMKA LDQVGLKDYA KSKPSGLSGG MQQRVGLARA
LALDPDILLM DEPFSALDPL IRRDMQSELL ELQSRVNKTI LFITHDLDEA LKLGDRIAIM
RDGVIVQIGE PEEILSNPAN EYVENFVRDV NRLKILTAGS IMEKPDVTVN ISDGPRKVLR
VLEKEGFSNA YVVDRQKRVK GVIKDTGALE ALKNNEKTIE NYLITDYPST SEDTPLNELL
QTASESDYPI AVVDEEDKLQ GLIVRVSVLA SLAEGEGSDN DDS
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