Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1615 |
Symbol | |
ID | 6315378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 1694075 |
End bp | 1695667 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642643991 |
Product | glycosyl hydrolase BNR repeat-containing protein |
Protein accession | YP_001917777 |
Protein GI | 188586232 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000316615 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 2.83087e-16 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGGACAAGC CATCTAAATA CTTATTTTTT TTATTAGTAT CCCTTATTAT AACTGTACCT ATTAATACAG TTATTTCCAC AACAGACACG GAAAATGAAA TTAAATCCTA TGAAATGGCT AAGTTAACTA ATGGAGCTAT ATCACTATAT CAACGACCTT TTTACCGACT TATAACAGGT ACAACAAACA GTTTACATAA ATGTGATTTC TCTGAGAAAA ATATACAAGT AAAGGATAAA AATAATGAAG TATCTTATAC TAAAAATCTT GAAGCAAATA TCACAGAACA ATCATATACA ATTGATGAAG AGGAATTCGG TTCTGTTACT ATTCAAAACA ACGATTTAGA AATACCTGTA GAAATCTCTA TAGATGAGAG TTTTATAGAT TCAAAGGAGA GTCTGGATAA TCAATCAAAG ATTTTTGAAA TTAAACCTGG GGATGCTATT ACAATCAATA ATGAACCAGA AAGAATTTAT TATCGGTCTT TGGCTGCTAC TGTAGATATT CAAATGATTG TTGGAGGAGA AATAGATATT AACAGTACAA CAGAACATCA ACCTGTTTTT AATGAAATCA GACCTGTACA ATTTGATGTT ATGGCTGTAG ACCGACAATC TTCCAAAGTC TTTGCATCTA GAGGGGATGC AATCTATAAG AATAAGGATA GTGGGGATTA TGGTAGTTGG ATTAAGAAAG CTACCTTTGA AGATAAACTA GTACAATCTA TGTTCTATAC AATGGATGGC TCATTATTAA TTACAACAAG TGAAGGGAAT GTTCTAAGGA GTACTGATGA TGGCAAAAGT TTTGAGACAG TATTAACGGA TATTGTTAGG TGGCGAGCTT TTGATTCTAT TCATCAGAAC TCAGAAACTG GTACAATAAT TTTTGGTGAA TATCCTAGTT TTACTGGTCC AGATGGCGAA ATTAGTTTAT ATAAGTCAAC AGATGACGGA AGGAATTGGG AACAAGTTTT GACTAGGACC GGTGATGATA TCCGTCATTG GCATTCTGTA CAAGTTGACC CTTACAGTGG TAATTGGATT GCCACCACAG GAGACTTGGA TAATGAAATT GAGTGGTGGG AATCAACTGA TGATGGTGAC ACATGGGAAG CAATTTTAGG AGCTGATTCA CCTAATGAAG GAAATCAAGA TTACCGAACG TTAGGATTAC TATTTTCACA AGACCAATAC ATATGGGGAT CAGATAATCC TCTTTGGGGC TATGGTCAAA ATTTTATTAG CTCCGTAGAT AAGGATAACC CAGAAAATAT TAGTAAAGAT TTTCGTTTAC CGGCTCCAGC TTATGTTTAT TGGCAGTTTA GCGATATTTG GGGAATTGGC ACATTGGCAG AAGGAACTAC AATGGAAGAC CAAAATGCCA GAATATACAC ATCCGAAAAT CGAGGACAAA CTTGGCAAGA AACTATTAGC TGGCCAATTG AGGCCTCAAA AAACTCAGGA GGTTTCACTA GTGTCAGTCA CCCTAATGGT GATGGGTATA TCTTTGTTAG GTTCAGTAGT GAATTAGTTG GTGCCCATGA AGAACCTTAC GACTACCGAA CTATGCGTTT AAAGCGACGC TAA
|
Protein sequence | MDKPSKYLFF LLVSLIITVP INTVISTTDT ENEIKSYEMA KLTNGAISLY QRPFYRLITG TTNSLHKCDF SEKNIQVKDK NNEVSYTKNL EANITEQSYT IDEEEFGSVT IQNNDLEIPV EISIDESFID SKESLDNQSK IFEIKPGDAI TINNEPERIY YRSLAATVDI QMIVGGEIDI NSTTEHQPVF NEIRPVQFDV MAVDRQSSKV FASRGDAIYK NKDSGDYGSW IKKATFEDKL VQSMFYTMDG SLLITTSEGN VLRSTDDGKS FETVLTDIVR WRAFDSIHQN SETGTIIFGE YPSFTGPDGE ISLYKSTDDG RNWEQVLTRT GDDIRHWHSV QVDPYSGNWI ATTGDLDNEI EWWESTDDGD TWEAILGADS PNEGNQDYRT LGLLFSQDQY IWGSDNPLWG YGQNFISSVD KDNPENISKD FRLPAPAYVY WQFSDIWGIG TLAEGTTMED QNARIYTSEN RGQTWQETIS WPIEASKNSG GFTSVSHPNG DGYIFVRFSS ELVGAHEEPY DYRTMRLKRR
|
| |