Gene Nther_1480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1480 
Symbol 
ID6315492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1552949 
End bp1553914 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content33% 
IMG OID642643860 
Producttranscriptional regulator, GntR family 
Protein accessionYP_001917651 
Protein GI188586106 
COG category[K] Transcription 
COG ID[COG1725] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.321595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.897854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAACGAA AAAGCAGAAC TCCATATTAT TTGCAAATAA AAGAAAATAT CAAAAAATTC 
GTTGAATTCG GATACTGGAC TAGTGGGACG AAATTACCGA CAGAACGTGA ACTGGCTGAA
CGACTTCAAG TTAGTAGAAA TACTGTTAGC ATGGCTTATA AAGAATTAGA AAGTGATGGT
GTGATTGTTT GTCATCAAGG AAGAGGAACT TTCATTGCAG AGAAAGATGA TAAGCTGAAA
CAGCAGAGTA GAAAAGAACA TTTATTAAAA ATAATTGATG TTTCCATTGA AGAAGCTCTA
CAATTAGGTT TTACTATCGA TGATTTTTTG GCCATAACTC ACGTTAGGGC AAGAGAGAAG
CAGGACATGT TAACTAAGTT AAATATAGCC TTTGTTGAAT GTAATCAAGA ACAACTTCAT
TACTTTGTAA ATGAATTGAA TTTTGATAAA GGTGTTTCAA TTATTCCTAT TCTTGTTTCT
GATTTAAAAA ATTATCCTGA CACCTATCGG GATAAATTGT CACAGGTAGA TATAATTATC
ACAACTTTCT TCCATTTAGA AGAGATTAAA GAATCTTTAC ACGATATCGA AGCTGAGATT
TTACCTATAG CTTTGGAATT ACAGATGGAG ACTGTTGTGA AAATCGCCAG AGTCCCCTCG
AATTCAAGAG TAGGTTTGAT ATGCAAGTCA GAAAACTTCG CTCATAAATT TATGAACTCT
TTAACAAAAG CAGGAATTGA TCATGTAAAA ATAGATTTTA TTATGACTGA ATCAAAAGAA
GAAATTATTG AATTTACGAA TAATGTGGAC TATGTTGTCA CCAGCCCTGG GAAAAAGCAT
GTTGTGGCAG ATATTATTGA TGCTGATCCA GAACAAGAGA TAACGGAGGT GATATTTAGA
CCAGATCAGG CTTCATTAAA TCTCTTGAAA AGTACACTAG TTGATTTAAA ACAAAAAGTT
AGTTAG
 
Protein sequence
MERKSRTPYY LQIKENIKKF VEFGYWTSGT KLPTERELAE RLQVSRNTVS MAYKELESDG 
VIVCHQGRGT FIAEKDDKLK QQSRKEHLLK IIDVSIEEAL QLGFTIDDFL AITHVRAREK
QDMLTKLNIA FVECNQEQLH YFVNELNFDK GVSIIPILVS DLKNYPDTYR DKLSQVDIII
TTFFHLEEIK ESLHDIEAEI LPIALELQME TVVKIARVPS NSRVGLICKS ENFAHKFMNS
LTKAGIDHVK IDFIMTESKE EIIEFTNNVD YVVTSPGKKH VVADIIDADP EQEITEVIFR
PDQASLNLLK STLVDLKQKV S