| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1411 |
|---|
| Symbol | |
|---|
| ID | 6315743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1479738 |
|---|
| End bp | 1480511 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 642643791 |
|---|
| Product | flagellar biosynthetic protein FliR |
|---|
| Protein accession | YP_001917582 |
|---|
| Protein GI | 188586037 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
|---|
| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.844633 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.465726 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGATCTGA CAACGTTGTT GCTAGAACAA GGCGTTTTAT TCATATTGTT ATTAACTAGA
ATATCTGGCA TGATAATGAC AGCACCAATT TTTGGAAGTA ATTATATGCC CAATCAAATT
AAAATAGCCT TTAGTTTAAT ATTGACACTG GTTTTTTTAC CTGTTTTATC TCCTGAAGGT
TTATCTGATT ATCATATCAT GAATGTTATA TTATTTGCTT TTATGGAGTT AATGGTCGGA
ATAGCAATAG GTATGATCGC CAATTTGGTA TTTTCTTCAA TACAAATAGC TGGACAATTA
ATTGATGTAC AAATGGGATT TGCTATGGCT AGGGTGATGG ACCCCCAGTA CGAAACTCAA
GTACCTTTAA TAGGTCAATT TAAATATATT TTAGCTATCA TGATTTTTTT AGTTATAAAT
GGTCATCACT TATTAATTAG ATCAGTTTAT GAAAGTTATC AATTGCTACC TATTGGCAAT
ATATTTGATT TAGGTGCAGG GGGAGTAGCT CTTAATGAAC TGTTCTCCAC AGTGTTTGTT
TTGGCTATTC AGGTGAGTGC TCCCGCTCTT GGTACTTTAT TTTTGACAAA TATAGCTTTG
GGGGTTTTGG CTAGAACTGT ACCCCAAATG AATGTATTTA TTATTGGGTT TCCTGTGAAA
ATTTTTGTAG GATTTCTGTC CCTGGTATTA TTAATGCCTA CTTATACTTT GGTTTTGGGA
AACTTATTTC AGCACATTTG GGATGGTTTA TATAACTTCT TACAAGCTTT ATAG
|
|---|
| Protein sequence | MDLTTLLLEQ GVLFILLLTR ISGMIMTAPI FGSNYMPNQI KIAFSLILTL VFLPVLSPEG
LSDYHIMNVI LFAFMELMVG IAIGMIANLV FSSIQIAGQL IDVQMGFAMA RVMDPQYETQ
VPLIGQFKYI LAIMIFLVIN GHHLLIRSVY ESYQLLPIGN IFDLGAGGVA LNELFSTVFV
LAIQVSAPAL GTLFLTNIAL GVLARTVPQM NVFIIGFPVK IFVGFLSLVL LMPTYTLVLG
NLFQHIWDGL YNFLQAL
|
|---|
| |