Gene Nther_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1336 
Symbol 
ID6316554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1409677 
End bp1410366 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content41% 
IMG OID642643716 
Productpeptidase membrane zinc metallopeptidase putative 
Protein accessionYP_001917507 
Protein GI188585962 
COG category[R] General function prediction only 
COG ID[COG2738] Predicted Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0322886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.654146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTTT TCGATACAGG GCTCATTCTA TTCGTAATAC CAGCGTTTAT ATTTGTAATG 
TATGCCCAAA ATAAAGTGAA AGGAACCTAT CAAAAATATG TGAGGGTTCC CAGTAAGAGA
GGGTTTACTG GTGCTCAGGT TGCCAGGGCT CTTTTGGATA AGTCGGGCTT ATCTGATGTT
CGAGTTGAGA AAAGTAAAGG AGAGCTAAGT GACCATTACG ATCCCAGGAA AAAAGCAGTG
CGACTATCTC CAAATGTTCA TGACGGCACC TCTATAGCAT CTTTGGGGAT AGCAGCCCAT
GAAACTGGTC ATGCTATTCA GCACGCAGAT GGATATTTTG CACTGTCTTT AAGAAATATG
GTCTTTCCAG CTGCCAGTTT TGGTTCTAAA CTAGGTGTAC CCTTGTTCTT TATTGGATTT
ATATTTGCTG AGGGTATGGG AACCACCTTT ATGGATTTAG GAATTGCGCT GTTTTTCTTT
GCCGTGTTAT TTCAAATAAT TACTCTCCCT GTGGAGTTTA ATGCCAGTAC TAGAGCTGTT
GCAGCCCTAG AAGGCGGCGG TTATTTGACT TCAGATGAAG TTAAACCTAC TAAACAAGTT
TTAAATGCTG CGGCGATGAC ATATGTTGCT GCTACTGCTA TGGCACTAGC TCAATTACTC
CGTTTAATAA TGTTACGAGG AAGGCGTTAA
 
Protein sequence
MFFFDTGLIL FVIPAFIFVM YAQNKVKGTY QKYVRVPSKR GFTGAQVARA LLDKSGLSDV 
RVEKSKGELS DHYDPRKKAV RLSPNVHDGT SIASLGIAAH ETGHAIQHAD GYFALSLRNM
VFPAASFGSK LGVPLFFIGF IFAEGMGTTF MDLGIALFFF AVLFQIITLP VEFNASTRAV
AALEGGGYLT SDEVKPTKQV LNAAAMTYVA ATAMALAQLL RLIMLRGRR