Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1318 |
Symbol | |
ID | 6315556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 1389805 |
End bp | 1390602 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642643698 |
Product | RNA-binding S4 domain protein |
Protein accession | YP_001917489 |
Protein GI | 188585944 |
COG category | [S] Function unknown |
COG ID | [COG2302] Uncharacterized conserved protein, contains S4-like domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.210837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAACTG ATAAACAAAC AATTATGAAT CACTATACTC ATCCTCTGGA AAAGGAAACA GCCAGTAAAA TATTCGATAA AACAGACAAA GTGTTTAAGG AGCAAGGGAT GGAAACTACA GATTTTTTTG ATCCACATCA GTTAACTATT GCAGAAAAAG TGATTAATAC ATTCTCTGAT GTTTCAGCTT TATTTTATGG TGGTTTAGCT GATGCGGAAA GGAAAAAGGT TGGGATTTTC CCTAAGGAAT GGAATGTTAC CCCTGATCAA TTGGGGATCG AAGTACTAGA GCTTAGAGGA AATTTTAGAT TTTCTAGTAT TTCTCATAGA GATGTTTTAG GTGCTGTCAT GGGTCTAGGT TTAAAGAGGG ATAAAATTGG TGATATTCAT GTCATGGAAG AGGAACACAG GTTGATTATT GCTGTTGATG AAAGTATCTC CCAATTCATT ACACAAAATT TAACACAAGT AAAAAATGTA TCAGTATCAG CTGAAGCTAT GGATCAGGAA GAAATCCCTC GCCAGCAAGA GTACACTCGT GAAATAAAGG GAACTGTATC TAGTTTAAGA TTAGATGCTG TTGCCAGTAT AGGTTTCGGA GCTTCTAGAA GTAAAATGAG TCAGTTGATA AAAGCAGAGA GGATAAAACT CAACTGGCAA CCTACTAAAG ATCCTAAGGC TACTGTTTCT GAAGGAGATG TGATTTCATT AAGAGGAAAA GGAAGAGTGG AAATATCTGC AATCGGTGGT AAAAGCCGAA AGGGTAGGAG ACATGTAACA TTAAAGCGTT ATAAATAA
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Protein sequence | MGTDKQTIMN HYTHPLEKET ASKIFDKTDK VFKEQGMETT DFFDPHQLTI AEKVINTFSD VSALFYGGLA DAERKKVGIF PKEWNVTPDQ LGIEVLELRG NFRFSSISHR DVLGAVMGLG LKRDKIGDIH VMEEEHRLII AVDESISQFI TQNLTQVKNV SVSAEAMDQE EIPRQQEYTR EIKGTVSSLR LDAVASIGFG ASRSKMSQLI KAERIKLNWQ PTKDPKATVS EGDVISLRGK GRVEISAIGG KSRKGRRHVT LKRYK
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