Gene Nther_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1318 
Symbol 
ID6315556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1389805 
End bp1390602 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content36% 
IMG OID642643698 
ProductRNA-binding S4 domain protein 
Protein accessionYP_001917489 
Protein GI188585944 
COG category[S] Function unknown 
COG ID[COG2302] Uncharacterized conserved protein, contains S4-like domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.210837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAACTG ATAAACAAAC AATTATGAAT CACTATACTC ATCCTCTGGA AAAGGAAACA 
GCCAGTAAAA TATTCGATAA AACAGACAAA GTGTTTAAGG AGCAAGGGAT GGAAACTACA
GATTTTTTTG ATCCACATCA GTTAACTATT GCAGAAAAAG TGATTAATAC ATTCTCTGAT
GTTTCAGCTT TATTTTATGG TGGTTTAGCT GATGCGGAAA GGAAAAAGGT TGGGATTTTC
CCTAAGGAAT GGAATGTTAC CCCTGATCAA TTGGGGATCG AAGTACTAGA GCTTAGAGGA
AATTTTAGAT TTTCTAGTAT TTCTCATAGA GATGTTTTAG GTGCTGTCAT GGGTCTAGGT
TTAAAGAGGG ATAAAATTGG TGATATTCAT GTCATGGAAG AGGAACACAG GTTGATTATT
GCTGTTGATG AAAGTATCTC CCAATTCATT ACACAAAATT TAACACAAGT AAAAAATGTA
TCAGTATCAG CTGAAGCTAT GGATCAGGAA GAAATCCCTC GCCAGCAAGA GTACACTCGT
GAAATAAAGG GAACTGTATC TAGTTTAAGA TTAGATGCTG TTGCCAGTAT AGGTTTCGGA
GCTTCTAGAA GTAAAATGAG TCAGTTGATA AAAGCAGAGA GGATAAAACT CAACTGGCAA
CCTACTAAAG ATCCTAAGGC TACTGTTTCT GAAGGAGATG TGATTTCATT AAGAGGAAAA
GGAAGAGTGG AAATATCTGC AATCGGTGGT AAAAGCCGAA AGGGTAGGAG ACATGTAACA
TTAAAGCGTT ATAAATAA
 
Protein sequence
MGTDKQTIMN HYTHPLEKET ASKIFDKTDK VFKEQGMETT DFFDPHQLTI AEKVINTFSD 
VSALFYGGLA DAERKKVGIF PKEWNVTPDQ LGIEVLELRG NFRFSSISHR DVLGAVMGLG
LKRDKIGDIH VMEEEHRLII AVDESISQFI TQNLTQVKNV SVSAEAMDQE EIPRQQEYTR
EIKGTVSSLR LDAVASIGFG ASRSKMSQLI KAERIKLNWQ PTKDPKATVS EGDVISLRGK
GRVEISAIGG KSRKGRRHVT LKRYK