Gene Nther_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1245 
Symbol 
ID6315264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1313715 
End bp1315307 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content32% 
IMG OID642643623 
Producthypothetical protein 
Protein accessionYP_001917416 
Protein GI188585871 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0027528 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.060022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCA AAACCTCTAG TAAGAAGAAA CTAGATAAAG TCTTAAATAA CTTTGAGTTA 
TATGCCAAGA ACTTTATGAA GGTAGTTGAT ATAACAGGTG AAGAAGTTCC CTTAACATTA
AACGAAGAAC AGAGATACCT TTACAGGAAC ATGGATAAAT ATAATATTTG TCTAAAATCC
CGACAGTTAG GAATAACTAC ACTTAGTTGT GCTTATTCAG TCTATTTAGC ATGTACTAGG
AAAAATGTTA CTTCAATGAT TGTCAGTTAT AATCTTGAAA GTACACAAGA GATTTTTAAT
AAACTAAAAA GCATTTATAA TAGTATTCCC GATGATGAGA GAATCAAGCC AAAGGAGTTA
AGAAATAACA GATATGAATT GTTACTTGAA AATGGTAGCA AGGTACTTGT AAAAACAGCA
GGGTATAAAG AGCTATCACG TGGTTTAACT TTGAGTTTTG CCCACCTATC AGAATACGCT
TTTTGGAATG AGTGGGTACA AACAAAAGGA TTAATGGGTT TAGAACAGTC CTTAATGAAG
TCAGATGAAC CTGGGAAAGG TCAAATAATA ATTGAAAGTA CCGCCAATGG TCTTAACAAA
TTTTACGAGC TTTTTAAATC AGCAGAGAAG GGTAACAGTA AATACAAACC CTTCTTTTTT
AATTGGATAG ACAATAAAAA GCAGTTTGCT AGTGAATATG ATATTGCTGA AAAGTGGTAT
AAGTCTATCA ATAAAGGAAA TAGATTAACA ACAAAAGATT TAACAGATGA AACGTCAAAA
AAATTGTACT ATGAAAAAGG TGCTAATTTA AAACAGATAA TGTGGCGTTA TTGGAAGTTA
CAGGATATGA CAGAAGAAGA ATTCTGTCAG GAATATCCCT CACATTCTGA ACAGGCATTT
ATAAGTAGTC AGAAGTCAAT ATTTGATACT GAAATGATTG TTAAAAGATT AGATAATTTA
CTTCCACCAT TGCCAAAGGA AGAACTAGCT GATCTGCCTA GTAAACTAAA AAAATATCTT
AACAATGGAT TGGATATTTA CAATAGACCA AAGAGAGAAC GCCATTTTGC AGGTGTTGAT
GTTGCTAGTG GTTCTGGTGC TGATTATTCT TCAATCATAG TTCTAAACAA AGATGGTGAA
CAAGTTGCTA GTTTTTATAG AAATGATGTA CCAGTCCATG AGTTTGCTGA AATAGTTAAC
GAGCTAGGCA GGTATTTTAG TTATGCTTAT ACCTGTATAG AAAGAAATTC ATACGGACTC
CCATTAATTG AAAGACTAAG AGAAAGGCAT CAATATATGA ACTTATACAA GATGAAAACA
TTTGACCAAA GAGGTAAAAA GAAAAAACAG TTGGGATGGT TAACTACAAA CGCATCTAAA
AGCATTATGA TAACGGACTT AAAAGAGTTA TTTGAGAAAG GGTTAATTAA TATTAACTGT
CAAAGAACAC TTGAAGAAAT GAGGATATTT GAAGTTAGAG AAGATGGAAG TACAGGAAAC
AAGCAAGGAG AAGAAAACCA TGATGATATG GTGATTGCTC TAGCTTTAAG TGTGGTTGCT
TTAAAAGATA ATAAATATTT TGTAAAGATA TAA
 
Protein sequence
MAVKTSSKKK LDKVLNNFEL YAKNFMKVVD ITGEEVPLTL NEEQRYLYRN MDKYNICLKS 
RQLGITTLSC AYSVYLACTR KNVTSMIVSY NLESTQEIFN KLKSIYNSIP DDERIKPKEL
RNNRYELLLE NGSKVLVKTA GYKELSRGLT LSFAHLSEYA FWNEWVQTKG LMGLEQSLMK
SDEPGKGQII IESTANGLNK FYELFKSAEK GNSKYKPFFF NWIDNKKQFA SEYDIAEKWY
KSINKGNRLT TKDLTDETSK KLYYEKGANL KQIMWRYWKL QDMTEEEFCQ EYPSHSEQAF
ISSQKSIFDT EMIVKRLDNL LPPLPKEELA DLPSKLKKYL NNGLDIYNRP KRERHFAGVD
VASGSGADYS SIIVLNKDGE QVASFYRNDV PVHEFAEIVN ELGRYFSYAY TCIERNSYGL
PLIERLRERH QYMNLYKMKT FDQRGKKKKQ LGWLTTNASK SIMITDLKEL FEKGLININC
QRTLEEMRIF EVREDGSTGN KQGEENHDDM VIALALSVVA LKDNKYFVKI