| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1165 |
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| Symbol | |
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| ID | 6315647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1233359 |
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| End bp | 1234792 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642643538 |
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| Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_001917336 |
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| Protein GI | 188585791 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.243116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.00329602 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGAAAGCAC CAGATGTATT ATACAAAGAT GTACTTGATG CTTTAGATGA AGGTGTACAC
GTGGTCGATG CCAATGGTCA AACAATCTTT TATAACAGGC AAATGGGACA GTTAGAGGGA
ATGGAGCAAG AACAAGTAAT TGGGAAGCCT TTATTAGAAG TTTTTCCTTG TTTAAACTCA
GAAACCAGTA CTCTCTTGAA AGTATTAGAA ACTGGTCTTC CAATTAAAAA CAGAGTTCAA
ACTTATTTAA CAATAACAGG TACTCAAGTG ACTACAGTAA ATAGCAGTTA TCCCATTAAA
ATAAATGATA ATATCGTTGC AGCTTGTGAA ATTGCAAAGG ATATTACAGA GCTGAAAAAT
ATGTCGGAAG AAATTATCGA ACTGAAACAA AAGATGATTT CAGAAGGAAC AGAAGATTTG
GATGAAGAAG ATGATGAACA AACTGCTATT GTAGGTAAAA GCCGTGTGAT CAGACAAGTT
CTTGATTACA CTAGAAAAAT AGCCAATACA CCTTCCAATG TATTGATTTA TGGTGAAACA
GGAACAGGTA AAGAGATGTT TGCCAGAGAG ATCCATCAAA AGAGCCACAG GAAATCCAAT
CCTTTTATTG CTCAAAATTG TGCAGCTTTA CCTTCTGAAT TAGTCGAAGG AATTTTATTT
GGAACAGTAA AGGGAGGTTT TACTGGTGCT GTAAATAGAC CAGGATTATT TCAGCAAGCT
CACAAAGGGA CTTTGCTTTT AGATGAAATT CATACTTTGC CACTTCATTT GCAGGCAAAG
TTGTTAAGGG TTTTGGAAGA AAAGAAAGTT CGACCAGTAG GAGGGAAAGA AGAACAGGAT
GTTGATGTAA GAGTTATTAC AACAATGAAT ACTGATCCCA TCAAGGCCAT GGAAGAAGAG
ACCCTTCGAC CAGATCTATA TTATAGAATC AGTGTCATTA ACTTGTTTTT GCCTCCTTTG
AGAGACAGAA AAGAAGATAT CTTGCCATTG ATAGACTATT TCCTACAAAA ATTTCAAAAG
GAATTTAATA AAGAAATTAA AGGGATGGAC CAAAACTTAC TGGAAAAATT ACAAAATTAT
TACTGGCCAG GTAATGTCAG AGAGCTAGAA CACTCTATTG AAGCAGCTAT GAATGTAATT
GAAAGTGGGG AACGCATGAC CGTAGAACAC TTGCCACCTT TAATGAAACA AAATATCTTT
GAAATTGATC AGGACTGGCA CGATGATACA ACAATTAATG AACAAGAACT AATTGATTTT
GAAGAAGGAG AAACTCTACC CAATAAGATG GCAAGCTTTG AAAGAAAGGC CATTGAAGGA
CAACTAAAAA AATATAATGG TAACATATCT CAAGCTGCTA ATAGCTTGGG GATAAGTAGA
CAAGCGTTAC AGTATAAAAT TAAAAAGTAC CGTTTAGCGG ATATCGCAAA TTAA
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| Protein sequence | MKAPDVLYKD VLDALDEGVH VVDANGQTIF YNRQMGQLEG MEQEQVIGKP LLEVFPCLNS
ETSTLLKVLE TGLPIKNRVQ TYLTITGTQV TTVNSSYPIK INDNIVAACE IAKDITELKN
MSEEIIELKQ KMISEGTEDL DEEDDEQTAI VGKSRVIRQV LDYTRKIANT PSNVLIYGET
GTGKEMFARE IHQKSHRKSN PFIAQNCAAL PSELVEGILF GTVKGGFTGA VNRPGLFQQA
HKGTLLLDEI HTLPLHLQAK LLRVLEEKKV RPVGGKEEQD VDVRVITTMN TDPIKAMEEE
TLRPDLYYRI SVINLFLPPL RDRKEDILPL IDYFLQKFQK EFNKEIKGMD QNLLEKLQNY
YWPGNVRELE HSIEAAMNVI ESGERMTVEH LPPLMKQNIF EIDQDWHDDT TINEQELIDF
EEGETLPNKM ASFERKAIEG QLKKYNGNIS QAANSLGISR QALQYKIKKY RLADIAN
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