Gene Nther_1145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1145 
Symbol 
ID6315371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1210279 
End bp1210968 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content36% 
IMG OID642643517 
ProductAllophanate hydrolase subunit 1 
Protein accessionYP_001917316 
Protein GI188585771 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2049] Allophanate hydrolase subunit 1 
TIGRFAM ID[TIGR00370] conserved hypothetical protein TIGR00370 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.110827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.406689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAT TACAGATATT ACCTGCCGGG GATAAAGCTG TTGTTATGGA GTTCGAAAAT 
GAGATTTCAC CAGAAGTCAA TGCTAAAATA AGAGCAACGG ATCATTTGTT GAGAGAGGAG
TTTCAATTAA AAGGCATTAC AGAAATAATA CCAACTTATA GATCATTACT AATATACTAC
GATGAAAAAT ACTGGGATTT TGAAACCCTG TCAAAAAAAT TAGTTGAAAT ACCTCATTAT
CTGGAAGAAA AGGAGATTCC TGAGCCAAAA ACTCTAAATA TACCTGTTGT TTATGGTGGT
GAATACGGGC CAGATTTAGA ATATGTAGCG GAGTACAACA ATCTAACTTC AGATCAGGTG
ATAGAAATAC ATCATACAAC AACTTATTTA ATTTATATGC TAGGTTTTGT TCCTGGGTTC
ACCTATTTAG GTGGAATGTC GGAGAAAATA GCTACACCCC GATTAAAAGA CCCCAGGGCT
AAAATTCCTG AAGGTTCAGT AGGCATTGCT GGTAGTCAGA CTGGTGTATA TCCCTTAGAA
AGTCCAGGAG GATGGCAACT AATAGGACGC ACACCATTAA AGTTTTATGA TCCTAACAAA
GAAGATCCTT TCCTGCCGAA ACCAGGATAT CACTTAAAGT TTTATCCTAT TACTGAAGAT
GAATATCGAG AATTTAAAAA TAAGTATTAG
 
Protein sequence
MSKLQILPAG DKAVVMEFEN EISPEVNAKI RATDHLLREE FQLKGITEII PTYRSLLIYY 
DEKYWDFETL SKKLVEIPHY LEEKEIPEPK TLNIPVVYGG EYGPDLEYVA EYNNLTSDQV
IEIHHTTTYL IYMLGFVPGF TYLGGMSEKI ATPRLKDPRA KIPEGSVGIA GSQTGVYPLE
SPGGWQLIGR TPLKFYDPNK EDPFLPKPGY HLKFYPITED EYREFKNKY