| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0945 |
|---|
| Symbol | |
|---|
| ID | 6314922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1002516 |
|---|
| End bp | 1003217 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642643318 |
|---|
| Product | Haloacid dehalogenase domain protein hydrolase |
|---|
| Protein accession | YP_001917118 |
|---|
| Protein GI | 188585573 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTATTA TCTGGGATTT GGATGGTACT TTATACAATT TCTACTTACC GGCCAAAATA
TCTTTACATG TAACCTGGGA ATATGGATGG TATAATGACT ATGTAAAGAA ACAGGAGTGT
TACCACTTTT TTGAACAATC TCATGGTGAA TATGTTTGGG AATTGAGGTT CTGGGAACAA
TTATATAAAT CAACTCAGAA AAACTATGGC CAGGAGACCA CAATCAATGC CATGGCCGAT
ATCATTAACA AGGCCTGGTA TATAAATAAT AATCCTAACT CAAAATCCAA TGCATATGAA
CTGGGAAAAC TGTGGTGGAA AACTTTTTTT GAGAACTTAT CTCCAGAACC CTGGGTGTTA
CCACTTCTAA GAAAATTATT CAAGCATGGG ATTCCCATGG GATTGTTGTC AAATAGCCCA
CGGGAAATGG GAAAGTTAAA ATTAAAGCAT TTAGGATTAG AAGATTTCTT TAATGAAGAA
AATACGATTT GGACAGTGGA TACTGGGTAT TTTAAACCAG ATAAATATCC ATTTCTACTT
ATGAGTGAGA TACTAAATTG TCAAACTAAC CAGGTTTTAG TGGTAGGGGA CAATTATAAA
ACTGATGCCT TGGGAGCTCA AAATGCCGGA ATGACTTATT TTTTGTACAA GGGAGATAAC
TTTGGAGAAT TACTGAAAAG ACTTAAAGCT TTTTGGAGGT GA
|
|---|
| Protein sequence | MGIIWDLDGT LYNFYLPAKI SLHVTWEYGW YNDYVKKQEC YHFFEQSHGE YVWELRFWEQ
LYKSTQKNYG QETTINAMAD IINKAWYINN NPNSKSNAYE LGKLWWKTFF ENLSPEPWVL
PLLRKLFKHG IPMGLLSNSP REMGKLKLKH LGLEDFFNEE NTIWTVDTGY FKPDKYPFLL
MSEILNCQTN QVLVVGDNYK TDALGAQNAG MTYFLYKGDN FGELLKRLKA FWR
|
|---|
| |