Gene Nther_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0886 
Symbol 
ID6314840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp933692 
End bp934168 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content38% 
IMG OID642643259 
ProductPyruvoyl-dependent arginine decarboxylase 
Protein accessionYP_001917059 
Protein GI188585514 
COG category[S] Function unknown 
COG ID[COG1945] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00286] arginine decarboxylase, pyruvoyl-dependent 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000475255 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTAG ATTTAAAAAC TTTAAAATAC TTCAAATTGG TAACCGGAAC AGGTGAGGGC 
AATACCTCAT TAACAGCTTT TGATAAAGCT CTCTTAAATG CAGAAGTCGG TAATTTCAAT
TTATTAAAAG TAACTAGTAT TCTCCCAGCT AGAGTTAAAC AAAAGGATAA AATCACTGTT
TCCGAGGGAG GAATCCTCCC TATTGCATAC GGGTCAGTCA CTAGCTGTAA TTCCGGAGAA
ATCATTTCAT CGGCGGTAGC AGTAGGAATC CCAGCTTCTT CCAGGGCTCA TGGAATGATA
GTAGAAACTT CAGGATACAG ACCTAAAGAA CAATCTCTTA AAATCGCAGA AAATATGATA
GCTGAGACCT TTGAAAATCG AGGTTTAGAG CTACAAGAAG TATTAACCAA AGGTTCCGAA
CTAAAAATAA GAGATATAAG CTGTGGAAGT GTTTTTTCAG GTGTAGCACT CTTTTAA
 
Protein sequence
MAVDLKTLKY FKLVTGTGEG NTSLTAFDKA LLNAEVGNFN LLKVTSILPA RVKQKDKITV 
SEGGILPIAY GSVTSCNSGE IISSAVAVGI PASSRAHGMI VETSGYRPKE QSLKIAENMI
AETFENRGLE LQEVLTKGSE LKIRDISCGS VFSGVALF