Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0686 |
Symbol | |
ID | 6316310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 711263 |
End bp | 712498 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642643067 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001916867 |
Protein GI | 188585322 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.626773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACTC TTCAAGGGAA TATACCAGGT TATATGATTG TCATGATTCT TTCTATGGGA GCCTTTGGTG TCATGGGAGG CGCTTTAGTA GCCCCCGCTC TTCCAACCAT TGGTAGAGCT TTTGAGGTAC CAGAAGGACA GCAAGGCTTT ATACTAAGTG TTTATACTTT AGCAGCAGCC TTAAGTCTAC CTTTCATTGG ATATTTAATA GATGTAATTG GTAGACGAAG AGTGGCTTTG GCTTGTTTGC TAATTGATGG AGCTGCCGGA GTTTCTATTA TATTTGCCCC TAGTTTTGGG GTAGTGTTAA TTTTAAGATT TATCCAGGGG ATTGGTATAG CTGGATTAAT TCCAGTTGCC ATGACTATTA TTGGAGATTT GTTCTCAGGA GAAAAAAGAC TACAAATTAT GGGTTATTTA ACAGGGATAA TTTCCCTCGG AGCAGCAGTT ATACCTACAC TGGGTGGAGC TTTGGCGTCC TTTGATTGGC GCTTTGTGTT TGCCGTTTAT GGTCTCGGAT TTGTGTTTGC CTTGTTTTTC TTGTTTACTT TGCCTGAAAC CTCTCCGTTT CACTTTAATG CAGGTTCTAG TAGTGATAAT AACAATAATC AAGGTGATAA GACTAATCAA AATACTGCTC ACAAATCTCC TATAGAATAT ATTAATTCAT TATTTACAGT TTTCAAAAAT AAAAGTATTC GTAATATTAT GTTTCAACCG TTAATGAACT ACTTTTTTTT ATATGCTTTG GTAACCTTTT TCCCGATATT TTTAGTGACA GTCCACGGTT TCGCAGAAAT ATTTAATGGA CTAGCCCTGT CAATGCAAGG ACTGTTTTCA GCCATAATTG CTTCTCGAGC GGATTTAGCA GCTCGTTTTA TGACCTGGTG GCAAAGAATT TCGATAGGAT TTATTTTGAA AGGTATTGCC TTTTTATTAA TGCCTTTATG GCCTACAGGG AGTTTTTTAC TTAGCATAAG TATTATCATA TATGGAGTAG GGTTTGGGAT TGTTTCGCCT ACTATATACA ACAGGGCCAC CAAGTTACCA CCTCAAGACC TGATTGGCTC GGTAGTTGCA ATTTTTAATA CCATGAGATT TTTAGGAATG ACTTTGTCTC CATTTTTATT GGGAATCATT CTTGGCTTTA CTACATTAAA TGTGGTATTT TTAATTGTTG GTGTAGTTTC AATCATGTGG GGGACTTTTT CCATGTCACA AAAAATGATT GCTTAA
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Protein sequence | MRTLQGNIPG YMIVMILSMG AFGVMGGALV APALPTIGRA FEVPEGQQGF ILSVYTLAAA LSLPFIGYLI DVIGRRRVAL ACLLIDGAAG VSIIFAPSFG VVLILRFIQG IGIAGLIPVA MTIIGDLFSG EKRLQIMGYL TGIISLGAAV IPTLGGALAS FDWRFVFAVY GLGFVFALFF LFTLPETSPF HFNAGSSSDN NNNQGDKTNQ NTAHKSPIEY INSLFTVFKN KSIRNIMFQP LMNYFFLYAL VTFFPIFLVT VHGFAEIFNG LALSMQGLFS AIIASRADLA ARFMTWWQRI SIGFILKGIA FLLMPLWPTG SFLLSISIII YGVGFGIVSP TIYNRATKLP PQDLIGSVVA IFNTMRFLGM TLSPFLLGII LGFTTLNVVF LIVGVVSIMW GTFSMSQKMI A
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