Gene Nther_0686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0686 
Symbol 
ID6316310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp711263 
End bp712498 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content37% 
IMG OID642643067 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001916867 
Protein GI188585322 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.626773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACTC TTCAAGGGAA TATACCAGGT TATATGATTG TCATGATTCT TTCTATGGGA 
GCCTTTGGTG TCATGGGAGG CGCTTTAGTA GCCCCCGCTC TTCCAACCAT TGGTAGAGCT
TTTGAGGTAC CAGAAGGACA GCAAGGCTTT ATACTAAGTG TTTATACTTT AGCAGCAGCC
TTAAGTCTAC CTTTCATTGG ATATTTAATA GATGTAATTG GTAGACGAAG AGTGGCTTTG
GCTTGTTTGC TAATTGATGG AGCTGCCGGA GTTTCTATTA TATTTGCCCC TAGTTTTGGG
GTAGTGTTAA TTTTAAGATT TATCCAGGGG ATTGGTATAG CTGGATTAAT TCCAGTTGCC
ATGACTATTA TTGGAGATTT GTTCTCAGGA GAAAAAAGAC TACAAATTAT GGGTTATTTA
ACAGGGATAA TTTCCCTCGG AGCAGCAGTT ATACCTACAC TGGGTGGAGC TTTGGCGTCC
TTTGATTGGC GCTTTGTGTT TGCCGTTTAT GGTCTCGGAT TTGTGTTTGC CTTGTTTTTC
TTGTTTACTT TGCCTGAAAC CTCTCCGTTT CACTTTAATG CAGGTTCTAG TAGTGATAAT
AACAATAATC AAGGTGATAA GACTAATCAA AATACTGCTC ACAAATCTCC TATAGAATAT
ATTAATTCAT TATTTACAGT TTTCAAAAAT AAAAGTATTC GTAATATTAT GTTTCAACCG
TTAATGAACT ACTTTTTTTT ATATGCTTTG GTAACCTTTT TCCCGATATT TTTAGTGACA
GTCCACGGTT TCGCAGAAAT ATTTAATGGA CTAGCCCTGT CAATGCAAGG ACTGTTTTCA
GCCATAATTG CTTCTCGAGC GGATTTAGCA GCTCGTTTTA TGACCTGGTG GCAAAGAATT
TCGATAGGAT TTATTTTGAA AGGTATTGCC TTTTTATTAA TGCCTTTATG GCCTACAGGG
AGTTTTTTAC TTAGCATAAG TATTATCATA TATGGAGTAG GGTTTGGGAT TGTTTCGCCT
ACTATATACA ACAGGGCCAC CAAGTTACCA CCTCAAGACC TGATTGGCTC GGTAGTTGCA
ATTTTTAATA CCATGAGATT TTTAGGAATG ACTTTGTCTC CATTTTTATT GGGAATCATT
CTTGGCTTTA CTACATTAAA TGTGGTATTT TTAATTGTTG GTGTAGTTTC AATCATGTGG
GGGACTTTTT CCATGTCACA AAAAATGATT GCTTAA
 
Protein sequence
MRTLQGNIPG YMIVMILSMG AFGVMGGALV APALPTIGRA FEVPEGQQGF ILSVYTLAAA 
LSLPFIGYLI DVIGRRRVAL ACLLIDGAAG VSIIFAPSFG VVLILRFIQG IGIAGLIPVA
MTIIGDLFSG EKRLQIMGYL TGIISLGAAV IPTLGGALAS FDWRFVFAVY GLGFVFALFF
LFTLPETSPF HFNAGSSSDN NNNQGDKTNQ NTAHKSPIEY INSLFTVFKN KSIRNIMFQP
LMNYFFLYAL VTFFPIFLVT VHGFAEIFNG LALSMQGLFS AIIASRADLA ARFMTWWQRI
SIGFILKGIA FLLMPLWPTG SFLLSISIII YGVGFGIVSP TIYNRATKLP PQDLIGSVVA
IFNTMRFLGM TLSPFLLGII LGFTTLNVVF LIVGVVSIMW GTFSMSQKMI A