| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0672 |
|---|
| Symbol | |
|---|
| ID | 6316264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | - |
|---|
| Start bp | 696625 |
|---|
| End bp | 697578 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642643053 |
|---|
| Product | Substrate-binding region of ABC-type glycine betaine transport system |
|---|
| Protein accession | YP_001916853 |
|---|
| Protein GI | 188585308 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAGAA TAATTTCAAA TAATAAAATA ATATTATTTA TGATTGTAAT CATCACCACA
GGTGGCCTGA TGGCAGCCTG TGGTGATGAA GCAATCCCAG AAGAAAGCAC TAAAGTTGAA
GAACAAGAAC AAAATCCAGA TAATGAAAAG TCAGAAGAAC AATCTGAAGA CGAACAGCAG
ACAACTCAAA CAATTGAGAT TGCTTACGTA AACTGGGCTG ATTGTGTTGC AACTACTTAT
TTAGCTAAGG AAATTTTAGA AGAAGAAATG GGATATGAAG TCGAATTAAC AATGGCCGAT
CCGGGACCAA TTTATACTGA TATTGCTGAA GGTGAACACG ATGTATTTCT AGGTGGTTGG
TTACCAATTA CTCATGAAGA ATACTGGGAA GAATATCAGG ATAAAGTAGA TAAAATTAGT
CCTAACTTTG AAGGTGCAAG AATTGGACTA GTAGTCCCTG ATTATGTAGA TATCGATAGT
ATTGAAGACA TGAATGATGT GACTGATAAA TTTGACGGTG AAATAATTGG AATTGACCCC
GGTGCTGGAA TTATGCAAAC AACAGAAACC GCTTTAGAAG AATATGGTCT AAACTTTAAT
TTAATCGAAG GTAGTGACCC TGCCATGGCA ACTGCTCTAC AAGAAAGCAT TGAAGAAGAG
GAATGGGTAG TAGTTACAGG TTGGATTCCT CATTGGAAAT TTGCCACCTG GGATTTAGAA
TTCCTTGAAG ATCCAAAAAA AGTATATGGA GAACAAGAGA ACATCTATAA TATCGGAAGA
TCTGATTTAG AACAAGATTT ACCGGAAGTA AGAGAGTTCT TAGAAGAGTT TCAGCTTTCC
CAACAAGGTT TAGGAGAGTT AATGGCAGAT ATTAATGAAA CAGAAGATGA AGAGGAATCT
GCCAAAAGGT GGATTGAAGA CAATTCTGAC AAAGTTGAAG ACTGGACCCC CTAA
|
|---|
| Protein sequence | MLRIISNNKI ILFMIVIITT GGLMAACGDE AIPEESTKVE EQEQNPDNEK SEEQSEDEQQ
TTQTIEIAYV NWADCVATTY LAKEILEEEM GYEVELTMAD PGPIYTDIAE GEHDVFLGGW
LPITHEEYWE EYQDKVDKIS PNFEGARIGL VVPDYVDIDS IEDMNDVTDK FDGEIIGIDP
GAGIMQTTET ALEEYGLNFN LIEGSDPAMA TALQESIEEE EWVVVTGWIP HWKFATWDLE
FLEDPKKVYG EQENIYNIGR SDLEQDLPEV REFLEEFQLS QQGLGELMAD INETEDEEES
AKRWIEDNSD KVEDWTP
|
|---|
| |