| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0539 |
|---|
| Symbol | |
|---|
| ID | 6314266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 561520 |
|---|
| End bp | 562836 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642642923 |
|---|
| Product | electron transport complex, RnfABCDGE type, C subunit |
|---|
| Protein accession | YP_001916723 |
|---|
| Protein GI | 188585178 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
|---|
| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCTA AAACTTTTCC GGGAGGAGCA TATATACCTC ATTATAAATT TACTGACGAC
AAGCCGATTG AGGACATGTC TATTCCCGAA GAGATAGTAA TTCCCTTAGC CCAGCATATT
GGATCCCCAT GTGAACCGCT GGTAAAAGTT GGTGATAGGG TTGAAGTTGG TCAAAAAATT
GGTGATTCAG AGGAATATAT TACCGCACCA GTACATGCCA GCGTTTCAGG AGAAGTTGTG
GCTATAGAGG AAAGGCCGTT TTTTGAAGGG GATGAAGTTG AAAGCATTGT CATTAAGCCT
GATAGTGAAC AGCAGGAGTT TTCTTATGAT GAGAAGAATA TTGAAGATAT GAGCTTAGAT
GATATGAAAG ATAGAATTAG AGAAGCAGGA GTAGTAGGAA TGGGTGGTGC AGCTTTCCCG
ACTTATGTAA ACATCAATCA ATCTAAGCCC ATCGATAGTT TGTTGATCAA TGGAGCTGAA
TGTGAACCAT TTCTAACATG CGATCATAGA CAAATGGTCG AGCGCAGTGA GGAATTAGTT
ATCGGAGCAG AAATTCTAAT GAATATTATA GGTGCCAAAA AATGCTATTT TGGTATTGAA
GAAAATAAAC CTGATGCAAT TGATGCAGTT TCCAAGCAAA TCGAGGGTAA AGACGGTATG
GAAGTTGTTC CTCTTAAGAC AAAATATCCT CAAGGATATA AAGTTAATGT AATCCATGCA
TGCACCGGTC GAGATGTTCC TCGGGGAGTC AGATCCGCTG ACTTAGGTTG TATAGTTAGA
AATGTAGGAA CCACTATTGC TACCTATGAA GCCGTCAAAT ACGGTAAACC ATTAATGGAA
CGAGTTGTAA CTGTAAGTGG TTATAATATT CCTGAAGCTG GTAACTACAA TATTAAAATT
GGCACACCCG TTGAGCATGT TTTAAGAGAG TGTGGAGTAG ATAACTTTGA AAATCAGAAG
GTGATTCTTG GTGGGCCAAT GACTGGTACC GCTGTCAAAG ATATCAGATC TTCAGTAGTA
AAAAATAGCA CAGGTTTATT ACTATTTCCT GAAGATATGA CCTGGGACTA CACCGACTAC
AATGAATGTG TCCGTTGTGG TAAATGTGTA GAACGATGTC CTGTTCATCT ATATCCCAAT
AAGATAGGGA TGTATGCTGA ACACAAACAA TACAGTAAAG CCGAGGAATG GGATATAATG
GACTGTGGTG AGTGTGGTAC ATGTGTATAC TTCTGTCCTG CTAACCGACC AATTTTAATG
TGGATCCAGC AAGTTAAGCC CACTGTTAAA AGGAGACAAC GGCAACGAAG TAAATAG
|
|---|
| Protein sequence | MEAKTFPGGA YIPHYKFTDD KPIEDMSIPE EIVIPLAQHI GSPCEPLVKV GDRVEVGQKI
GDSEEYITAP VHASVSGEVV AIEERPFFEG DEVESIVIKP DSEQQEFSYD EKNIEDMSLD
DMKDRIREAG VVGMGGAAFP TYVNINQSKP IDSLLINGAE CEPFLTCDHR QMVERSEELV
IGAEILMNII GAKKCYFGIE ENKPDAIDAV SKQIEGKDGM EVVPLKTKYP QGYKVNVIHA
CTGRDVPRGV RSADLGCIVR NVGTTIATYE AVKYGKPLME RVVTVSGYNI PEAGNYNIKI
GTPVEHVLRE CGVDNFENQK VILGGPMTGT AVKDIRSSVV KNSTGLLLFP EDMTWDYTDY
NECVRCGKCV ERCPVHLYPN KIGMYAEHKQ YSKAEEWDIM DCGECGTCVY FCPANRPILM
WIQQVKPTVK RRQRQRSK
|
|---|
| |