Gene Nther_0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0424 
Symbol 
ID6317118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp443333 
End bp444490 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content37% 
IMG OID642642808 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001916608 
Protein GI188585063 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTAAGA ATTTTATCCT CTTACTAGTA GTAGCATTAT TGGTTTTTAT TAATTTCTTT 
TCATTTGTAG TAGTAATTCC TCTTTATGTC ATAGATTTAA ATGGCAGTGA ATTTCATGTT
GGTTTTCAAA ATGCATTGTT TTATATATCG GCTATCTTGT TTAGAGGTTA CTTCGGTCCT
TTGGCCGATG TAAAAGGGCG GCGGCTCCCT TTGTTTATAG GTATACTAGC TTTTTCAGGA
GCTTCAGCTC TATTTTTGAT CAGCAATAAT TTGTGGCATA TTTATGGTAT CAGGATATTC
CAATCTATAG GATTAGCTGC ATTTTTCTCA ACTGGAGGTT CTCTAGTTGG TGACATGGCT
CCTCCAGGTA AAAGTGGTGT TTATATGGGT GGATATCGCT TAATAAATAC TTTAGCCCTG
TTACTGGGTC CCTGGATTGC CATTTCAACA ATCAATAGCT TTAACTACCA GGCTTGGTTC
ACTTTAGGAG CTATAATTGG TTTGCTTGCT CTTGTTATCG CATGCTTCAT AGAAATACCA
ACAATTTCAT CCCAGGGATC CGAAGGAAAT GTTGATACAA CATTTATTGA TAGATTTAAG
AATGCTTTCC AAATGGAAAA TGCTCGAGTT ATTTTTTTAG GAACTGGAAT CATTGCCTGT
TCCCTTGGTA TTTTACAGAC TTTTGCGTCT GTGTACACTG AAAAAGTAAC TGAAATAGCC
AACCCCGGAC TTTACTTCAC TATCTTTGGA ATTGCTGGAA TTATAGCAAA TGTGTTATCA
GGATATCTAA CAGATAATTG GGGAAGAAGT AAAGTGCCAT GGCCATTTCT TACCTTAATG
GGACTAGGTT TATTTATCTT TGCCCTGCTT CCTTATAATG AAATTTTCTT CTTGCTAAGT
AGCTTGATTG CTGGCTTTGG TTTTGGAGGC GGAATAACTG CTCTGTTTAC ATGGACGATT
GAAGTTTCTG GAGAGCAGCT ACGAGCTACA GCTCTAAGCA TCCAAGAGAG TGCCATAGAT
ATATCAATTG CCATGGGTTC TTTTATCTTT GGGATATTGG TAGCGATGAT CGATTATAGT
ATATCTTTTG TATTTGTAGG TTTTGTGACT GTAGTTTTGG GAGTAATCTT GATGCGAAAA
TACTCCTTTT CAAATTAG
 
Protein sequence
MTKNFILLLV VALLVFINFF SFVVVIPLYV IDLNGSEFHV GFQNALFYIS AILFRGYFGP 
LADVKGRRLP LFIGILAFSG ASALFLISNN LWHIYGIRIF QSIGLAAFFS TGGSLVGDMA
PPGKSGVYMG GYRLINTLAL LLGPWIAIST INSFNYQAWF TLGAIIGLLA LVIACFIEIP
TISSQGSEGN VDTTFIDRFK NAFQMENARV IFLGTGIIAC SLGILQTFAS VYTEKVTEIA
NPGLYFTIFG IAGIIANVLS GYLTDNWGRS KVPWPFLTLM GLGLFIFALL PYNEIFFLLS
SLIAGFGFGG GITALFTWTI EVSGEQLRAT ALSIQESAID ISIAMGSFIF GILVAMIDYS
ISFVFVGFVT VVLGVILMRK YSFSN