| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4970 |
|---|
| Symbol | |
|---|
| ID | 4595343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008697 |
|---|
| Strand | + |
|---|
| Start bp | 303064 |
|---|
| End bp | 305532 |
|---|
| Gene Length | 2469 bp |
|---|
| Protein Length | 822 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639772752 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_919412 |
|---|
| Protein GI | 119714270 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00792904 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGTACAAGA TTGAGCAGCG CGGGCGACGC GTCGTGCTGC CTGCGACCGA TGACCCGGGC
GTGGTGCTGG AGTTCTCGAT GTGGGATGCG GAGAAGACGC TCAAGTCGTT CATCCGTGTC
TCCGGCGGAG AGCGCCGCAG GCACCTGGCC AGAGTCAAGG TCGGCTTAGT CCACCGCTCC
GACAACACCT ACAACCCGGG CGCGGTCGCA GTCGTCATCC CTGCCGACCA GGGCGGCAGC
GTCGAGGAGC GGCACCTGGG CTTCCTCTAC GACGCCGACC TGCGCGAGAT CGGGTCGAGC
AAGCTCCCGG CCCTGATCCG GTACGCCGGC GGGGAGGTCG AGTGCGACGC CGTCATCGCT
GACCGGGCGA CTCTCGGCCT GGACCTGCCC GACCTCGCCG TACTCGGGAA CGCCATCGGC
AAGTTCCTCC GCAGCAGTGG CGCCGACCCT GGGGCATCGG TGATGCCCGA ACCGGTTCCT
GAACGTATCG GGGACAGGTT CCGTACCCGA ACCATTCTCG GTACCGACGA AACCCTCGAC
CTGCTGCGCG CCTCCCCCGA ACCGGGAGGC GCCATCGCTG GGGTGGACAT CTCGATGGCC
TATCCGTTCG AGAGCGACTC GTGGACGCTG AACCTGCACG AGTCGGCCAC CGGCCGGCAC
CTGGGCACAG TCCAGGACAC CACGTTGTTC CTCGGCAACG AGCGCGACCG TGAGGCCGTA
CTTCCCCACC TGGCTGCCCA GGAGGTCCCG GCCCGGCAAC CGAAGCCGGC GCCGCGGGCG
ACCGTTCCCG GGTCGTGGCC CACCGGTCAG GTACCGAACG TTCGACCGAA GTGGGACCGT
GGAGCGATCG CGCTGCACGC AGCAGGCGCT CCCGAGAGTC ACTCCATGGA ATCGTTCGCG
ATCTTCAACC CCGAGACCGG AGTCCTGTGG GTCGAGGATC AGCGGCTGGT CGACGTCGCG
TCCCTGTGCA CCAGCCGTCT CGGCCTCGAC GTCAAGCGCG TACGCACTCC GCGGGAGCCG
TGGGAGCTGG ACGAGGAGGT TTCCCACGAG GACCTGTGGG GCACGCGGCG CCGAGGAACG
TCGATCGACC CATGGGCCAA GCCGGCGCTG CTGGCGTACC AGCAGCGCGC CGTCCCGCGC
GGGATCCTGA CCAGGCTGGT CACCTTCAAC GGCGTCGCAG ACCCGGCCGC GTCGCAGGCG
GCAGCAGATG CACGGTTCGC GGTCCACCAC CGGTTCGTCC GGGGCAGGCG ACGCATCTTC
CCCGAACACA CGCTGCTGGG CACCTCGGCG CCGTGCCGGT TGTGCGGTGC CGCTGCGCTT
GAGTTCACGA CCCCGATCAG CACCGGGGAA CTTGCGTACT GCCACACCTG CCTGCGGCAC
GCGACCTCCG GGCTTGGGGA TGACCTGGAC CGGGCGGTGA AGGCGGTGAA GGTCATCATC
GAGACCGAGT TCGACGGCGA CCTGTTCCTC GAGCAGCAGC TGGCGCCGCT CCACATCAGC
CCTGCCGCCC CGGTCGCGGC CGAGTTGATC GACCGGGCGC TACTGCTGAG GTTCGCGATC
GCCCGCGGCG TGTTCCCGTG GACCCACGTC CTGGAGGCGA CCGGCCTGGC GAAGGATGGG
CTGCGCACCA GCCGGGGAAC CCTGATCCGG GCACGCGACG GGCACCTGTG CCATTCGCTG
CGAGAGAAGG CCGTGTGCGA CTTCCTGCAC ATCCGCGGCA TCTCCCACAC CCGGGAGCCG
ATGTACCCCA GCGACGTCGA CTACAACCCA AACGGGCTCC GTCGAGCCGA CTGGGCGCTC
GCAGACGGGA CCCTGGTGGA GCTGTGGGGC ATGCCGGACG ACCCCGCCTA TGCCGCGAAG
ATGGTGGAGA AGCGCGAACT GACGGCGCGC CACGGGCTGC GGCTGGTCGA GCTCCTGGAC
CGCGACCTGC CCAACCTGCC GGACATCTTC GCCGAATGGG CACCCGACGG TGTCGACTCC
GGGTGGGAAT GGTCCCCGCT CCTGCTCGTA TCCCAGCAGG CGCAGGATGC TGCGGCGGAG
AAGGCCGTCC GGGCGAGGGC CGCCAAGAAG GCGGCGCCCG ACGGCACGGT TCGCGGCGTG
AACGCGGCGA GCGTCGCTGC TCGTGACGAG CGGCTCGAAC GGTGCCGCCA CGCGCTCCAA
CTGCAGGCCA AGGGACGGAC CCGGGCCACC ATCGCCGCGG AACTCGGTGT GAGCAGTGAT
GCAGTGAAGG CACTGCTGCG CGACGGCAGG TTCTACGCAG ACCCCTCGAC CGCTCCGGCG
CGCCGCGGAC TGGCGGAGCT GGCAGCGAAA GCCCGGAACT CCGGCACGAC GAGGACGGCG
TTCCAGGAGG CACATGGTCT CTCGCCCGAC AGGGCGAAGG AGTGCTGGCG GGACGCCGGG
GTGCTGGTCC CCACCGACAT CGACCGGCAG TCCTCAGCAG GGTCAAAGGG GGACGCTGGG
TCAGGGTGA
|
|---|
| Protein sequence | MYKIEQRGRR VVLPATDDPG VVLEFSMWDA EKTLKSFIRV SGGERRRHLA RVKVGLVHRS
DNTYNPGAVA VVIPADQGGS VEERHLGFLY DADLREIGSS KLPALIRYAG GEVECDAVIA
DRATLGLDLP DLAVLGNAIG KFLRSSGADP GASVMPEPVP ERIGDRFRTR TILGTDETLD
LLRASPEPGG AIAGVDISMA YPFESDSWTL NLHESATGRH LGTVQDTTLF LGNERDREAV
LPHLAAQEVP ARQPKPAPRA TVPGSWPTGQ VPNVRPKWDR GAIALHAAGA PESHSMESFA
IFNPETGVLW VEDQRLVDVA SLCTSRLGLD VKRVRTPREP WELDEEVSHE DLWGTRRRGT
SIDPWAKPAL LAYQQRAVPR GILTRLVTFN GVADPAASQA AADARFAVHH RFVRGRRRIF
PEHTLLGTSA PCRLCGAAAL EFTTPISTGE LAYCHTCLRH ATSGLGDDLD RAVKAVKVII
ETEFDGDLFL EQQLAPLHIS PAAPVAAELI DRALLLRFAI ARGVFPWTHV LEATGLAKDG
LRTSRGTLIR ARDGHLCHSL REKAVCDFLH IRGISHTREP MYPSDVDYNP NGLRRADWAL
ADGTLVELWG MPDDPAYAAK MVEKRELTAR HGLRLVELLD RDLPNLPDIF AEWAPDGVDS
GWEWSPLLLV SQQAQDAAAE KAVRARAAKK AAPDGTVRGV NAASVAARDE RLERCRHALQ
LQAKGRTRAT IAAELGVSSD AVKALLRDGR FYADPSTAPA RRGLAELAAK ARNSGTTRTA
FQEAHGLSPD RAKECWRDAG VLVPTDIDRQ SSAGSKGDAG SG
|
|---|
| |