Gene Noca_4890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4890 
Symbol 
ID4595260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008697 
Strand
Start bp222113 
End bp222775 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content66% 
IMG OID639772675 
Producthypothetical protein 
Protein accessionYP_919335 
Protein GI119714193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.257477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACCA CCCAGACCCA AGAGTCTCCC GACACGGCAC AGGGACCACG CGATGTCGCA 
ACGGTCTTCC TCAACGCCTT GACTGCGCGG GACTTCACCA CGGCACGCAC GGTGCTCGCC
GACGATCTCG CGATGAGGAT GCTCGTCCCG CCCGGATTCA TGACCGACGA GGGCGGCGAC
GCAGCAATCG GCTGGTTCTC CAGCTGGTTC ACCGACGCCG ATGCGTTCCA GGTGGAGGCA
TCAAGCGCCG AGGAGGTCGA GGGTCGAGCG GCCGTGGCCT ATCGGCTCCG GCTGCACAAG
CCGAACGGCT GGTACCTGAT CGAGCAGCAC CTGATGCTCG ACGTCGGTGC AGACGATCAG
GTGACGGCGA TCGATCTCCT GTGCTCGGGC TTCCGCACGA TCGCAGCGGA AGAGCCGGAG
TCGGAGTCGC AGCGGGTTCA CCGCTTCGAC GCGGGCGACC TCGGGTGCGC CGACGGGCTC
GCCGGGCATT TCCGCCAACA GATCCAGCGC ATTCCGATCG GCGACCTGCT CGTGGTCAGC
ACGAGCGATC CGGCCGCGAA GGAGGACTTG CCATCACTGG CCCGCCTGAT GGGCCATGTC
GTTGTTTCGA TCGAGGCACC CGGCGACGGA CGCCTGGTCA TCAGTGTGGA AAGGGGAAAA
TGA
 
Protein sequence
MSTTQTQESP DTAQGPRDVA TVFLNALTAR DFTTARTVLA DDLAMRMLVP PGFMTDEGGD 
AAIGWFSSWF TDADAFQVEA SSAEEVEGRA AVAYRLRLHK PNGWYLIEQH LMLDVGADDQ
VTAIDLLCSG FRTIAAEEPE SESQRVHRFD AGDLGCADGL AGHFRQQIQR IPIGDLLVVS
TSDPAAKEDL PSLARLMGHV VVSIEAPGDG RLVISVERGK