Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4890 |
Symbol | |
ID | 4595260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008697 |
Strand | - |
Start bp | 222113 |
End bp | 222775 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639772675 |
Product | hypothetical protein |
Protein accession | YP_919335 |
Protein GI | 119714193 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.257477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGACCA CCCAGACCCA AGAGTCTCCC GACACGGCAC AGGGACCACG CGATGTCGCA ACGGTCTTCC TCAACGCCTT GACTGCGCGG GACTTCACCA CGGCACGCAC GGTGCTCGCC GACGATCTCG CGATGAGGAT GCTCGTCCCG CCCGGATTCA TGACCGACGA GGGCGGCGAC GCAGCAATCG GCTGGTTCTC CAGCTGGTTC ACCGACGCCG ATGCGTTCCA GGTGGAGGCA TCAAGCGCCG AGGAGGTCGA GGGTCGAGCG GCCGTGGCCT ATCGGCTCCG GCTGCACAAG CCGAACGGCT GGTACCTGAT CGAGCAGCAC CTGATGCTCG ACGTCGGTGC AGACGATCAG GTGACGGCGA TCGATCTCCT GTGCTCGGGC TTCCGCACGA TCGCAGCGGA AGAGCCGGAG TCGGAGTCGC AGCGGGTTCA CCGCTTCGAC GCGGGCGACC TCGGGTGCGC CGACGGGCTC GCCGGGCATT TCCGCCAACA GATCCAGCGC ATTCCGATCG GCGACCTGCT CGTGGTCAGC ACGAGCGATC CGGCCGCGAA GGAGGACTTG CCATCACTGG CCCGCCTGAT GGGCCATGTC GTTGTTTCGA TCGAGGCACC CGGCGACGGA CGCCTGGTCA TCAGTGTGGA AAGGGGAAAA TGA
|
Protein sequence | MSTTQTQESP DTAQGPRDVA TVFLNALTAR DFTTARTVLA DDLAMRMLVP PGFMTDEGGD AAIGWFSSWF TDADAFQVEA SSAEEVEGRA AVAYRLRLHK PNGWYLIEQH LMLDVGADDQ VTAIDLLCSG FRTIAAEEPE SESQRVHRFD AGDLGCADGL AGHFRQQIQR IPIGDLLVVS TSDPAAKEDL PSLARLMGHV VVSIEAPGDG RLVISVERGK
|
| |