Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4830 |
Symbol | |
ID | 4595426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008697 |
Strand | - |
Start bp | 158824 |
End bp | 159723 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639772617 |
Product | integrase catalytic subunit |
Protein accession | YP_919277 |
Protein GI | 119714135 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.798983 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCGCT TCCAGTTCGT CGCCGACCAC CAGCACGCCT TCGAGGTGAA GCGGATGTGT GAGCTCGTCG AGATCGGACG CTCGTCGTTC TACGCCTGGC AGGCTGCCGC GCCAGGCCGG GAGGCGCGGG CCGAGGCCGA CGCCGAGCTC GCCGAGAAGA TCCGGACGAT CCACACCGAG GACAACACCA TCGGAGCACC ACGGGCGACC GCCGAGCTCA ACGACGGCGT CGCGCCGAGC GAACGGGTCA ACCACAAGCG GGTCGCCCGG GTGATGCGTG AGCACGACAT CCGCGGCTAC CAACGCAAAC GACGGGTCCG GACCACGATC CCCGAGCCGT CGCAGCAGAA GGTGTCCGAC CTGCTCAAGC GGGACTTCAC CGCCGACGCG GCCAACCTCA AGTACGTCGG CGACATCACG TACCTACCGA TCGCGGACGG CACGAACCTG TACCTGGCCA CCGTGATCGA CTGCTACAGC CGCCGAGTCG CGGGCTGGGC GGTCGCGGAC CATATGCGCG TCGAGCTCGT CCAGGACGCC CTCAAGGCCG CCCAGCTCAC CCGCGGCAGC CTCGCCGGCG CTGTGTTTCA CAGCGACCAC GGGTCGGTCT ACACATCGAA GGACTACGCC AAGCTCTGCG CCGACCTGGG CGTCACCCAG TCGATGGGTG CCGTCGGCAC GAGCGCCGAC AATGCACTCG CGGAGTCGTT CAACGCGACC CTGAAACGCG AGGTCCTCCA AGACGCCAAC GTGTGGCCTG ACGAGACCAC CTGCCGCCGC CAGGTGTTCC GGTGGCTCAT CCGCTACAAC AACCGCCGCC GGCACTCCTG GTGCCGCTAC CAGTCCCCGG TCGCCTTCGA GACCGGCACC ATCGCAGCTA GGCTCCCGTC AGCTGCGTAA
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Protein sequence | MTRFQFVADH QHAFEVKRMC ELVEIGRSSF YAWQAAAPGR EARAEADAEL AEKIRTIHTE DNTIGAPRAT AELNDGVAPS ERVNHKRVAR VMREHDIRGY QRKRRVRTTI PEPSQQKVSD LLKRDFTADA ANLKYVGDIT YLPIADGTNL YLATVIDCYS RRVAGWAVAD HMRVELVQDA LKAAQLTRGS LAGAVFHSDH GSVYTSKDYA KLCADLGVTQ SMGAVGTSAD NALAESFNAT LKREVLQDAN VWPDETTCRR QVFRWLIRYN NRRRHSWCRY QSPVAFETGT IAARLPSAA
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