| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4580 |
|---|
| Symbol | |
|---|
| ID | 4598678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4848664 |
|---|
| End bp | 4849953 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 639779189 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_925762 |
|---|
| Protein GI | 119718797 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGC GCAGGACCGA GGTGCGGGTC GCCGACCTGC TCGCGCTGCG CTCGTACGAC
GGGCCCGCCG ACGAGCGGTC CGCGGTGGTC CGGGTGCTGG TGGAGTCGGC GCCCGGGGCG
TTGGCGCTGG TGCCGCGGCC GGAGTGGCCG CCGCTGACGT CGCTGCGCTC GCGGCGGGCG
GAGGGCGGCT GGCTGGTCGT CGCCCGGTTC GCGCGCCCGG TGGCCGTCGC CGAGGTGGTG
TCCGAGCTGG GTCGCCAGGC GGTGTGGCCC GTGGTCGTGG CCGTCCGGGA GGACCCGGCG
CGGCTCGACG AGCGGCTGTT CAACCCGATC GGCTTCCGGT CGGCCTGGGA GCGCGGGGTG
GTGGCGTTGG GGTCGGCCCC GTTGACGCCT TCGCTGGTGG CCGAGCTGCG CGACGCCCAG
GGCGTGGCCG TCGGCCCGGA CGCCGACCCG CGGACGGTCG CGGGGCTGGC GATGGCCGGC
GTCCCGCTCA CCGGCGCCGG CTTCGACGAG GTGGACCTCG ACGACCCGCT GGCCCGCGAG
GAGCACAGCC TGGTGCTGCG CCGGGCCGCC CTCGACGCGC ACGGCTCGAT CGACTGGCAG
CGCCCGGTCT CGGTCCTGCT CGCCACCCGG CGGCCCGAGC AGCTGGACTT CGCGCTGGCC
CAGGTGGCCC GGCAGCGCGG GGTCGCCGCG TTGCAGCTGG TGCTCGCGCC GCACGGCTTC
ACGGTCGACG AGGCCTGGGT CCGCGCCGCG GTCGGTCCCG CGGTCGACGT ACGCCTCGCG
CCCGCGAGCG CCGACACGAT CTTCGGCGAC GTCCTGCACG CCGCGGCCGG GGTCGCCGAC
GGCGACGTGC TGCTGAAGAT GGACGACGAC GACTGGTACG CGCCCGACGT GGTCACCGAC
CTGCTCCGCG CCCGCGCCTA CAGCGGCGCC CAGCTGGTCG GCATGCCCGC GGAGTTCCAC
TACGTCGCAC CGCGCGACCT CACCGTGAAG CGCGGTCATC CCACCGAGCT GTACGCGCGG
TTCGTCGCGG GCGGCACGAT GCTGGTCGAC CGGCCGGTGC TGCGCGAGGT CGGCGGGTTC
CGCAGCGTGC GCAGGTACGT CGACGCCCAG CTGCTCACCG CCGTCACCGC CGCCGGCGGC
GCGATCTACC GCACCCATGG CCTGGGGTAC GTGCTGCGCC GCAACGAGTC CGGGCACACC
TGGGAGGTCG ACCTGGACTA CCTCCTCGAC CCCAGCCGCG TCGAGCGTTC CTGGACCGGG
CTCACCCCGT CGCGACTGAT GGAGCTGTAG
|
|---|
| Protein sequence | MAERRTEVRV ADLLALRSYD GPADERSAVV RVLVESAPGA LALVPRPEWP PLTSLRSRRA
EGGWLVVARF ARPVAVAEVV SELGRQAVWP VVVAVREDPA RLDERLFNPI GFRSAWERGV
VALGSAPLTP SLVAELRDAQ GVAVGPDADP RTVAGLAMAG VPLTGAGFDE VDLDDPLARE
EHSLVLRRAA LDAHGSIDWQ RPVSVLLATR RPEQLDFALA QVARQRGVAA LQLVLAPHGF
TVDEAWVRAA VGPAVDVRLA PASADTIFGD VLHAAAGVAD GDVLLKMDDD DWYAPDVVTD
LLRARAYSGA QLVGMPAEFH YVAPRDLTVK RGHPTELYAR FVAGGTMLVD RPVLREVGGF
RSVRRYVDAQ LLTAVTAAGG AIYRTHGLGY VLRRNESGHT WEVDLDYLLD PSRVERSWTG
LTPSRLMEL
|
|---|
| |