| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4443 |
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| Symbol | |
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| ID | 4596962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 4696833 |
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| End bp | 4698074 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639779054 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_925627 |
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| Protein GI | 119718662 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCACG TTTCGCTTCG CCAGGCTTGG ACAGCCGTGG CCCTGACCGG AGTGCTGGCG
CTCGGACTGG CAGCCTGCGG TGGTGACGAC TCGGAAGGCG GCGGTGGCGA CAGCTCCGGC
CCGATCCGGA TCGGCTCCTC GCTCCCGCTG ACCGGCGAGT TCTCCCAGCC CGGCCAGGCG
GCAAAGCAGG GCTACGAGGT CTGGCAGGAG ATGGTCAACG ATGCCGGCGG CCTCCTGGGC
CGGGAGGTCG AGCTCGTCGT CAAGGACGAC GCCTCGAACC AGAACACCGT GGTCACCGAC
TACAACGCGC TGATCAGCCA GGACAAGGTC GACCTCCTTC TCGGGACCTT CTCCTCGCTG
CTCAACCTGC CCGCCTCGGC GGTCGCGGAG AAGAACCAGA TGCTGTACGT CGAGCCCGCG
GGCGGCTCGC CCGACATGTT CAACCGCGGC TTCAAGTACC TCTTCTTCAC CCAGCAGGCG
ACCTCGAACC TGCAGGGCAA GGTGTTCGCC GAGTGGGTCG CCGCCCTCCC GGAGGACCAG
CGGCCGAAGA CCGCGGCGTA CCCGACCCTC GACGACCCGT TCGCCGCGCC CAACGTGGCC
GGCATCCAGG AGATCCTCGA GGCCGCGGGC GTGGAGACGG TCTACCAGGA GACCTACGCG
ATCGACACCA AGAACTTCGA CACGATCGTC AACGCCATGA AGAACGCGGA CCCCGACCTG
GTCGTGCACG GTGCGCAGTT CGAGGACGGC ATCGGCCTGA CCCGCTCGAT GCTCAAGGCC
GACTTCACCC CTGGCATGTT CTACGAGACC AACGCCCCGT CCTTCGGTGC GCAGTACAGC
GACGGCATCG GCATGGAGAA CACCGAGGGC GTCATCTACG CGGTCAGCCA CTCGCCTGAG
GCCGACACCC CCGGCAACGC CGAGTTCGTC GCCAAGTACA AGGAGATGTT CGGCACCGAC
GAGGTCCCCG AGGACGCCGC CGACGGCTAC GCCGCGGCCC AGGTGATGCA GGCGGCCGTC
GAGGCCGTGG GCAACATCGA CGACCAGGAG GCGATGGCGA GCTGGCTGCG CGAGAACGAG
GTCGACACGA TTCTGGGCTC GCTGTCCTGG GACGAGACCG GCGCGCCGAC CGGTGAGTTC
CTGATCGGCC AGTGGCAGAA CGGCAAGCCC GAGATCGTGC TGCCGGCCGA CGTGTCCACC
GCGGACATCG AGCCCGGCTG GCACCCGGGG GCCGGTGGCT GA
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| Protein sequence | MSHVSLRQAW TAVALTGVLA LGLAACGGDD SEGGGGDSSG PIRIGSSLPL TGEFSQPGQA
AKQGYEVWQE MVNDAGGLLG REVELVVKDD ASNQNTVVTD YNALISQDKV DLLLGTFSSL
LNLPASAVAE KNQMLYVEPA GGSPDMFNRG FKYLFFTQQA TSNLQGKVFA EWVAALPEDQ
RPKTAAYPTL DDPFAAPNVA GIQEILEAAG VETVYQETYA IDTKNFDTIV NAMKNADPDL
VVHGAQFEDG IGLTRSMLKA DFTPGMFYET NAPSFGAQYS DGIGMENTEG VIYAVSHSPE
ADTPGNAEFV AKYKEMFGTD EVPEDAADGY AAAQVMQAAV EAVGNIDDQE AMASWLRENE
VDTILGSLSW DETGAPTGEF LIGQWQNGKP EIVLPADVST ADIEPGWHPG AGG
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