| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4427 |
|---|
| Symbol | |
|---|
| ID | 4596946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 4680721 |
|---|
| End bp | 4681959 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 639779038 |
|---|
| Product | respiratory-chain NADH dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_925611 |
|---|
| Protein GI | 119718646 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.301864 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCCA CCGCCCTCGG CACCGCCCGG CTGCTCGGGG GCGTCACCCG GGGCGTCCGC
GCCGACCTGG TCACGCACCG GCACCGGCAC GGACCCCAGC GGCACCGCTC GGTCGAGGAG
CTGGCCGCCG CGGCCGCCGA GGTCCGGCTG CTGGGCCGCG GCGGCGCGGC CTTCCCGGTC
GCCACCAAGC TGCTGGCCGT CCCCACCGGG TCCCGGACCC AGGTCCTGGT CAACGGCTCG
GAGAGCGAGC CGGCCAGCCG CAAGGACCGG ACCCTGATGA CGCTGACCCC GCACCTGGTC
CTCGACGGGG CCCTGGCCGT CGCCCGGGCG CTGCGCACCC GGCACGTCAC GATCGCCGTG
CACGACGCGG CTGCGCTCGC CTCGCTGCGC ACCGCCCTCG ACGAGCGCGC CCGGGACGAG
CCGATCCACG AGCGGGTCGA CCTGCGCCGG ACGGCCGGCC GGTTCGTGTC CGGCGAGGTC
CGCGCGCTGC TGCGGGGACT GGACGGCGGC CCGGCCGTCC CGCCGAGCCG CCGTACCCTC
CCGTCGGACT CGGGGCTGCG CGGCGCCCCG ACCTTCGCCA GCAACGTCGA GACGTTCGCG
CAGGTCGCGC TGCTGGTCTC GCTGGGCGCG ACGGAGTTCG GGGCCGTCGG CAACCCGGAG
GAGCCGGGCA CCACCCTGCT CACGCTGCTC GGCGACACCC GGACCCAGGG GGTGGTGGAG
GTCCCGACCG ACCTGCCGCT GGACGCGCTG CTCCCGGGCG CGGGCGGCCC GGTGCTGGTC
GGCGGCTACC ACGGTCGTTG GGTGCGCGAC GTCGACGGCC TGGCGGCCGC CCGCCCCGGG
CTGCGCGCCG CCGGCCTCCC GCTCAACGCG GGCGTGGTCG CCCGGCTCCC GCGGGAGGTC
TGCGCCCTTG CCGAGGTCAC CGCGGTCACC CGATGGCTGG CCGCCCAGTC GGCCGGGCAG
TGCGGCCCGT GCCTGTACGG CACCGCGGCC CTCGCCCACG ACGTCGGGGA GCTGCTGCAC
GGGCGAGCCG CGCCAGCGGT CGAGGCGCGG CTGCGCGGCC TGGTCGGCCG CGGCGCGTGC
GCCCACCCCG ACGGCACCAC GGCGTTCGTC TCGACCGCCC TCGCGACGCT CGGCGACGAG
CTCGAGCTGC ACCGCCAGCA CGGCGGCTGC GGCCGGCCCT ACGCCGGCGT GCTCCCCCTG
GGCCCGCTCG GGCGCCCGGA CCCGGGCGGT GCCCGATGA
|
|---|
| Protein sequence | MSATALGTAR LLGGVTRGVR ADLVTHRHRH GPQRHRSVEE LAAAAAEVRL LGRGGAAFPV
ATKLLAVPTG SRTQVLVNGS ESEPASRKDR TLMTLTPHLV LDGALAVARA LRTRHVTIAV
HDAAALASLR TALDERARDE PIHERVDLRR TAGRFVSGEV RALLRGLDGG PAVPPSRRTL
PSDSGLRGAP TFASNVETFA QVALLVSLGA TEFGAVGNPE EPGTTLLTLL GDTRTQGVVE
VPTDLPLDAL LPGAGGPVLV GGYHGRWVRD VDGLAAARPG LRAAGLPLNA GVVARLPREV
CALAEVTAVT RWLAAQSAGQ CGPCLYGTAA LAHDVGELLH GRAAPAVEAR LRGLVGRGAC
AHPDGTTAFV STALATLGDE LELHRQHGGC GRPYAGVLPL GPLGRPDPGG AR
|
|---|
| |