| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4293 |
|---|
| Symbol | |
|---|
| ID | 4596811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4535431 |
|---|
| End bp | 4536582 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639778903 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_925477 |
|---|
| Protein GI | 119718512 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTGT CACTCAACGA GGACCAGCTC AGCTTCAAGA AGCTGGCCCG CGAGTTCCTC
GACGCGGAGG TCGTCCCGTA CCGCGGCGAG TGGGACCGCC GTGAGTCGGT CGACACCGCG
ATCATCCCCA AGCTCGGCGA CCTCGGGTTC TTCGGGCTCA CCATCCCCGA GGAGTACGGC
GGGCTGGGCG GCGACTACAT CACCTACTGC ATCGGCATGG AGGAGCTCGG CCGCGCCGAC
TCCTCGGTGC GCGGCATCGT GTCGGTCTCG ATGGGCCTGG TCGGGAAGGT GATCCTCTCC
CACGGGACCG AGGAGCAGAA GCACCGCTGG CTCCCCGGCA TCGCGACCGG CCGGACCCTC
GCGTGCTTCG GCCTGACCGA GCCCGACAAC GGCTCGGACG CCGCGAACCT GCGGACCCGG
GCGGTCCGCG ACGGCGACGA CTGGGTGCTC AACGGCGCGA AGATCTTCAT CACCAACGGC
ACCTGGGCCG ACGTCTGCCT GGTCTTCGCC CGCACCGGCG AGCCCGGCCC CCGCGGGGTG
TCGGCGTTCC TCGTGCCGAC CGACCTCCCC GGGTTCGGGC GCCAGGAGAT CCACGGCAAG
CTCGGGCTGC GCGGCCAGGC CACCGCCGAG CTCTCCTTCG ACAACGTGCG GGTGCCCGCC
GACGCGATGC TCGGCGCGGA GGGCGAGGGC TTCAAGATCG CCATGCACTC GCTGGACAAG
GGCCGCGTCT CGGTGGGTGC CGGGTGCGTC GGCATCATCC AGGGCTGCCT CGAGGCGGTC
GTCGACTACT CGGTGCAGCG CCGGCAGTTC GGCCGTCAGC TGGCCTCCTT CCAGCTGATC
CAGGACATGA TCGCGGAGAT CTCCGTCGAG GCCGACGCGG CCCGGCTGCT GGTCTGGCGG
GCCGCCGACC TGATCGAGCG CGACCAGCCC TTCGGCACCG AGGCCTCCAA GGCGAAGTAC
TTCGCCAGCG AGGCCGCCGT GCGCGCCGCG AACCTGGCGA TCCAGGCGTT CGGCGGCTAC
GGGTACGTCG ACGAGTACCC GGTCCAGAAG TACATGCGCG ACGCTCGGGT GATGACGCTG
TACGAAGGCA CCAGCCAGAT CCAGAAGCTG CTCATCGGGC GCGCCGAGAC CGGCGTCAGC
GCCTTCCTCT GA
|
|---|
| Protein sequence | MDLSLNEDQL SFKKLAREFL DAEVVPYRGE WDRRESVDTA IIPKLGDLGF FGLTIPEEYG
GLGGDYITYC IGMEELGRAD SSVRGIVSVS MGLVGKVILS HGTEEQKHRW LPGIATGRTL
ACFGLTEPDN GSDAANLRTR AVRDGDDWVL NGAKIFITNG TWADVCLVFA RTGEPGPRGV
SAFLVPTDLP GFGRQEIHGK LGLRGQATAE LSFDNVRVPA DAMLGAEGEG FKIAMHSLDK
GRVSVGAGCV GIIQGCLEAV VDYSVQRRQF GRQLASFQLI QDMIAEISVE ADAARLLVWR
AADLIERDQP FGTEASKAKY FASEAAVRAA NLAIQAFGGY GYVDEYPVQK YMRDARVMTL
YEGTSQIQKL LIGRAETGVS AFL
|
|---|
| |