| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4166 |
|---|
| Symbol | |
|---|
| ID | 4596680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4398409 |
|---|
| End bp | 4399623 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 639778772 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_925350 |
|---|
| Protein GI | 119718385 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00816288 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGACG TCCTCGACAC CCGCGTGTAC GGCGACCCCG CGGCCTGCTC GGCCGCGGCC
GGCGCCGTCG GCGGGGTGCG GAGGGCGGTG GCGGACGCCG AGTCCGCGGC CGGCAAGGCC
CGCTCGCTGG CGAGCTCGTG GCGCGGCCAG GCGGGCGCCG CGTTCGAGGC CCGGGTCGAC
GCGACCATCA CGGACCTGGC CGGGCTCGGC GAGCGGCTCG AGGCGATGCG GTCCGCGCTG
GGCGACTTCG CCGGCGAGCT CACCGTCGTT CGGGACCGGA TGGCCCACGC CCGGGCCGTG
GCCGCCGCGG GCGGCGTGAG CGTCACCGGC ACCGACGTAC ACCGCCCGGT CGCGCCGGAG
GTCATGAGCC AGGGCCAGGC CGACGCGTTC ACCACCCGGG CCGAGGCCTG GAACGAGGCG
GTCGGCATCG CCGAGGCGGC GCGCACCAAG GAGACCGAGG CGCACGACCA CCTGCGCGAC
GGCCTGGACC GGACGACCGG CGACGGCTTC CTCGAGGACC TGCTCGAGCG GCTCGGCCTG
CTGCCCGCCG ACTTCGCCGA CGGCGACGAC ATCGGGGCCT ACCTGCTCGG CCTGGGCGGC
CTCGGGTTCG GCGCGGCGAC CGGCTACCTG GTCTCCAGCC GCTACGGGAT CTTCCAGCCG
CGGGTCGCGG GCCGGTTCGC GAGCCCCGCC GGGCTCGACT TCTGGGGCCG GCTGCGGGCC
GGCGCGTCCG GCGACAGCTT CCACGCCCGC CCCTACACCG CGGGCGCGCG GGACTGGTGG
GGCCGGGCCG GCAAGGTCGG CGGGTACGCC GGCACCGCGC TCACCGGCGG CTTCGCGGCC
TGGAACCAGT GGCAGGCCGA CGCCGACGAC CCGTCGCTGA GCGACGCGAA CAAGGCCGGC
CGCGCCGGCG CGATGGGTGT GTCCACCGCC GCGGGCGCCT GGGCGGGCGC CGAGGCCGGC
GCCTGGGCCG GCGGCGCGAT CGGCACCGCG ATCTGCCCCG GCATCGGCAC CGCCATCGGC
GGCGTCGCCG GCGGCCTGGT CGGTGGCGCG GTCGGCGGGT TCGTCGGCAG CGAGGTCGGC
CAGGAGGTGA TGGGCGCGGT CGGCGACGCC ACCGAGGCCA CCGTCGACTG GGTCGGCGAC
GCCGCGGGCG ACGTGGGCGA CTGGGCCGGC GACACCGGCG GCGACGTCGT CGACGCCGTC
ACGTTCTGGG ACTGA
|
|---|
| Protein sequence | MSDVLDTRVY GDPAACSAAA GAVGGVRRAV ADAESAAGKA RSLASSWRGQ AGAAFEARVD
ATITDLAGLG ERLEAMRSAL GDFAGELTVV RDRMAHARAV AAAGGVSVTG TDVHRPVAPE
VMSQGQADAF TTRAEAWNEA VGIAEAARTK ETEAHDHLRD GLDRTTGDGF LEDLLERLGL
LPADFADGDD IGAYLLGLGG LGFGAATGYL VSSRYGIFQP RVAGRFASPA GLDFWGRLRA
GASGDSFHAR PYTAGARDWW GRAGKVGGYA GTALTGGFAA WNQWQADADD PSLSDANKAG
RAGAMGVSTA AGAWAGAEAG AWAGGAIGTA ICPGIGTAIG GVAGGLVGGA VGGFVGSEVG
QEVMGAVGDA TEATVDWVGD AAGDVGDWAG DTGGDVVDAV TFWD
|
|---|
| |