Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4102 |
Symbol | |
ID | 4596616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 4333319 |
End bp | 4334068 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639778708 |
Product | ABC transporter related |
Protein accession | YP_925286 |
Protein GI | 119718321 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACCG CGAGCTCGGA CCCGGCCCTG CTGGAGGTGT CGAACCTCCG CGTCAGGTTC GGTCACGTCG ACGCGGTCCG CGACGTCAGC CTGGCGGTGG GGCGAAGCCG TGTGGTCACC CTGCTCGGTC CCAACGGGGC GGGCAAGACC ACCACGCTCA AGGCCATCTG CGGCCTCTTG AGGCCCGCGC GCGGTGAGAT CAGGATCAAC GGCCGCCGCA CCAACGGTGT CGTGGCCTCG CGCGTCACCA AGCTGGGGGT GGGCTTGGTG CCGGAGGGCC GCCGGATCTT CCCGGCGCAC ACCGTCAAGG AGAACCTCGA GCTGGGGGGC TTCATCTGGC GGCGTCAGCG CCCGGTCTTC GACGAGACGC TCGCCTCGGT TCTCGAGCTG TTCCCTCGTC TGGCCGACCG GCTCGACCAA CTCGCGGGCA GCCTGTCCGG GGGCGAGGCA CAGATGCTGG CCGTGGGTCG CGCGATGATG ACGCGTCCCA GCCTGCTCAT CCTCGACGAG CCGAGCCTGG GCCTGGCACC CAAGATCGTC GACGAGCTGT ACGACTTCTT GGGCACGATC CGAGACCAGC AACAGCTGTC GATCCTCCTG GTCGAGCAGG CGGCCGACCG TGCCCTCCGG TTCGCCGACG ACGCCTATCT CCTGAGCCAG GGGCGGGTCG TCGCCAGCGG TCCCGCTGAG GCGCTGCGAG AGGACGACCA GGTGCGCAGC GTGTACTTCG GGGGGCTGGC CACCTCGTGA
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Protein sequence | MTTASSDPAL LEVSNLRVRF GHVDAVRDVS LAVGRSRVVT LLGPNGAGKT TTLKAICGLL RPARGEIRIN GRRTNGVVAS RVTKLGVGLV PEGRRIFPAH TVKENLELGG FIWRRQRPVF DETLASVLEL FPRLADRLDQ LAGSLSGGEA QMLAVGRAMM TRPSLLILDE PSLGLAPKIV DELYDFLGTI RDQQQLSILL VEQAADRALR FADDAYLLSQ GRVVASGPAE ALREDDQVRS VYFGGLATS
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