Gene Noca_4084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4084 
Symbol 
ID4596598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4313314 
End bp4314156 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content72% 
IMG OID639778690 
Productcyclase family protein 
Protein accessionYP_925268 
Protein GI119718303 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCG AACCCATGCC GACGACCGAG CCCCTGCTCA CCGCTGTGCG CGCAGGCGTC 
CGCGTCATCG ATCTCGGACG CACGTTGACC GTCGGGATGC CCCAGTCGCC CAACCACCCG
GCGTACTGGC ACTCGATGCC GCGTCGGCAC GGCGACATGG TCCGTGCCGA CGGGGCCTCG
GCCGCCAACG ACATGATCAC CATGGGCACC CACGTCGGCA CCCACATCGA CGCGCTCTCA
CACGTCTCCC AGGACGGCAA GCTCTTCGGT GGCCTGGACG CCGCCGAGGC CCTCGTGGGC
GGACGCTACA TCGAGCTCGG TGCCCACACC ATCGAGCCGA TGGTGCGCCG CGGCCTGCTT
CTCGACGTGC CCGGCACGCT GGGTGTGGCC TGCCTCGAGG CCGGCCAGGA GATCACCGTG
CCTGACCTCG AGGCGACGTT AGAACGCCAG GGCCTGACCA TCGGCGCGGG CGACGTGGTG
CTCGTGCGGA GCGGCTGGGG CCAGCACTTC GACGCGGGCG ACAGCGACAC CTTCCGCGGC
CTGTCCATCG GCGTGCCCGG CATCGGTGAG GCCGGGGCGG CCTGGCTGGC GGCCCACGGC
GTGCACGCCG TGGGCGCCGA CACCATCGCG TTCGAGCGGC TCGCGCCCGG CGCCGGCCAC
GGTCTGCTGC CCGCCCATCG GGTGCTGCTG GTCGAGCGCG GCATCTACAT CATCGAGACG
ATGGATCTCG AGGAGCTCGC CCGCGAGGCC CTCCACGAGT TCCTGTTCAT CCTCTCCCCC
CTGCCACTCT TCGGCGCCAC CGGCTCCCCG GTGCGACCGC TCGCGGTGGT CACCCGTGGC
TGA
 
Protein sequence
MSIEPMPTTE PLLTAVRAGV RVIDLGRTLT VGMPQSPNHP AYWHSMPRRH GDMVRADGAS 
AANDMITMGT HVGTHIDALS HVSQDGKLFG GLDAAEALVG GRYIELGAHT IEPMVRRGLL
LDVPGTLGVA CLEAGQEITV PDLEATLERQ GLTIGAGDVV LVRSGWGQHF DAGDSDTFRG
LSIGVPGIGE AGAAWLAAHG VHAVGADTIA FERLAPGAGH GLLPAHRVLL VERGIYIIET
MDLEELAREA LHEFLFILSP LPLFGATGSP VRPLAVVTRG