| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4045 |
|---|
| Symbol | |
|---|
| ID | 4596559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 4268193 |
|---|
| End bp | 4269347 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639778651 |
|---|
| Product | ATPase domain-containing protein |
|---|
| Protein accession | YP_925229 |
|---|
| Protein GI | 119718264 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATGCGA CGACGCAGGC GTTCCTCGCC GCGCTCATCG GAGCCGTCGT CGCGGGCGGC
GCGGTACTGG CGTGGCACCT CAGCGACCGC CAGCAGCACC ACATCCCGCC CGTCGAGGAT
CCGGTGGTGC CTGTCGGGGT CGCCGCGGTG CTCTCCGTCC TGCGCAGCAG CGCGGTCGTC
GTCGACGACG CCGACGTCGT CCTGAAGGCC TCCGCGCCGG CGTACGCGAT GGGCCTGGTG
CGCGGCACCG CCCTGGCCTC CACCGACCTC GCGGACCTGG TCCACCAGGT CCGCCGCGAC
GGCCAGATCC GGGAGACGGA GCTGCTGATG AGCCGCCCGG GCCTCCCGTC TCGGCACGTG
ACGGCGCGGG TCGCGCCGCT CGGCTCGCGG CTCGTGCTCG CGCTGGTCGA GGACCGCACG
CGCGAGCGTC GCGTGGAGGC GGTACGCCGG GACTTCGTCG CCAACGTCAG CCACGAGTTG
AAGACGCCGG TCGGCGCCAT CCGGCTGCTG GCCGAGGCGG TCCATGACGC CGCGGAGGAC
CCCGAGGCGG TCAAGCGCTT CTCCGACCGG ATGCTCACGG AGAGCGACCG GCTCTCCCGG
CTCGTGCAGC AGGTGATCGA GCTGTCCCGG CTCCAGGGCG ACGAGCCGCT GGAGCAGCCG
ATGCCGGTCG AGCTCGACGA GGTGATCAAG GTCGCTGTGG ACACCAGCGC GATCGACGCC
GACTCCAAGC GGATCTCGAT CGTCACCGGC GGCGTCTCGC ACCTGCAGGT CTTCGGCAGC
GAGGAGCAGG TCACCGCCGC GGTCGCGAAC CTGGTGGCCA ACGCGGTGTC GTACTCCGAG
AGCGACGCCA CCGTGCTGGT CTCGACGAAG GCCGATGACG ACATGGTGGA GATCTCCGTC
GTCGACCAGG GCATCGGGAT CCCGCCCGGC GAGATGGACC GGATCTTCGA GCGGTTCTAC
CGGGTCGACC CGGCCCGGCA CCGCTCCACC GGTGGCACCG GCCTGGGCCT GTCCATCGTC
AAGCACGTCG CGGCCACGCA TGGCGGAGAG GTCCGCGTGT GGTCCGTGGA GGGGCAGGGG
TCTACGTTCA CCTTGACCCT CCCCCGACAT GTCTCGGCCC GTTCGAACAC GTGGAACCAG
GAGGCTGGCC AGTGA
|
|---|
| Protein sequence | MDATTQAFLA ALIGAVVAGG AVLAWHLSDR QQHHIPPVED PVVPVGVAAV LSVLRSSAVV
VDDADVVLKA SAPAYAMGLV RGTALASTDL ADLVHQVRRD GQIRETELLM SRPGLPSRHV
TARVAPLGSR LVLALVEDRT RERRVEAVRR DFVANVSHEL KTPVGAIRLL AEAVHDAAED
PEAVKRFSDR MLTESDRLSR LVQQVIELSR LQGDEPLEQP MPVELDEVIK VAVDTSAIDA
DSKRISIVTG GVSHLQVFGS EEQVTAAVAN LVANAVSYSE SDATVLVSTK ADDDMVEISV
VDQGIGIPPG EMDRIFERFY RVDPARHRST GGTGLGLSIV KHVAATHGGE VRVWSVEGQG
STFTLTLPRH VSARSNTWNQ EAGQ
|
|---|
| |