Gene Noca_3952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3952 
Symbol 
ID4598087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4167070 
End bp4167939 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content78% 
IMG OID639778557 
Producthypothetical protein 
Protein accessionYP_925136 
Protein GI119718171 
COG category[S] Function unknown 
COG ID[COG3662] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGGAG TGCGCGAGCG GTTGGGCAGG GAGCTGTTCC GACGGGTGGC GGGACCGGAC 
GGCGCCAAGC ACGCCGCGCG CATCCACGGG CGGCCCGGGC CGCGGTGGTT CGAGCCGGAC
AGCCCGATCG CCCGGGTCCA CGGCGACGCC TCGATGTTCG TCGGCGGCAT CCGCGCCCTG
CTGCTCCAGA CCCTGCACCC GGCGGCGATG CGCGGGGTCG CGGAGCACTC CGGCTACCGC
GGCGACATGT GGGGCCGGCT CGCCCGCACC AGCCGGTTCC TGGCGGTGAC CACCTTCGGT
CACGCCGAGG ACGCGCAGCG GGCGGTCGAC GTGGTCCGAG CGATCCACGA GCGCGTGGTC
GGCACGATGC CGGACGGGAC GCCGTACGCC GCCTCCGACC CGCACCTGCT CGGCTGGGTC
CACGTGGCCG AGGTCGACAG CTTCCTGCGG GCGCACACCG TCTACGGCAA GGAGCCGCTC
GCCGGCGCCG ACCGGGACCG GTACGTCGCG CAGACCGCCG AGGTCGCCCG GCGGCTCGGC
GTGGTCGACC CACCCACCAC GGAGGCCGGG CTGGCGGCGG CGCTGGCGGC GTACCGCCCG
GAGCTGCGCG CGACGCCCGA GGCCCGCGAG GCCGTGTCCT ACCTGCTGCT GCGCCCCCCG
CTGCCGGTGG CCGCGCGGGC GCCGTACGGC GTGCTGGTGG CGGCTGCCGT CGCGCTGATG
CCGCGCTGGA CCCGGCGGCC GCTCCGGCTG CCGTGGCTGC CGGTCTCGGA GCGGACCGTG
GTGCGGGCGC TCGGCACGAT CGCGACCGGC ACCATCCGGT GGGCGATGGC CCCCGGGCGG
GAGCAGCGGA CCGGCCGCCG GGCTTCTTGA
 
Protein sequence
MPGVRERLGR ELFRRVAGPD GAKHAARIHG RPGPRWFEPD SPIARVHGDA SMFVGGIRAL 
LLQTLHPAAM RGVAEHSGYR GDMWGRLART SRFLAVTTFG HAEDAQRAVD VVRAIHERVV
GTMPDGTPYA ASDPHLLGWV HVAEVDSFLR AHTVYGKEPL AGADRDRYVA QTAEVARRLG
VVDPPTTEAG LAAALAAYRP ELRATPEARE AVSYLLLRPP LPVAARAPYG VLVAAAVALM
PRWTRRPLRL PWLPVSERTV VRALGTIATG TIRWAMAPGR EQRTGRRAS