Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3912 |
Symbol | |
ID | 4598047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 4117257 |
End bp | 4118252 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639778518 |
Product | integral membrane protein |
Protein accession | YP_925097 |
Protein GI | 119718132 |
COG category | [S] Function unknown |
COG ID | [COG1300] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00542014 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCTCG ACGCGTACGT CGGCGCGCAC GCGTCGGAGT GGCGCCGGCT CGAGGAGCTG ACCCGCAAGC ATCGGCTCAC GGGCGCCGAG GCCGACGAGC TCGTCGAGCG CTATCAGCGG GTCGCCACCC ATCTCTCGGT CGTACGCACC TCCGCGCCGG ACGCCACCGT CGTCGCCCAC CTCTCGGCCC TGCTCTCCCG GGCCCGCAAC CGGGCCACGG GCACCCGCAC GAGCACCTGG CGCGGCGTCC GCCTCTTCTT CGTCGACCGG TTCCCGGCCG CGCTGTACCG GCTGCGCTGG TGGTGGCTCG GCACGCTCGC GGCCAACGTC GCGGTGACCG CCGTGATGAT GCTGTGGTTG CTGGACCACC CGGCGGTCGA GCAGAGCCTG CTCTCACCCG AGCAGGTCGA CCAGTTGGTC GCCCACGACT TCGAGGACTA CTACAGCGAG TACGCCGCGA GTCACTTCGC CGCCCAGGTC TGGGTCAACA ACGCCTGGGT CGCCGCGCTG TGCCTGGCGC TGGGGGTGCT CGGCGTCCCG GTCGTCTACC TGCTGTTCCA GAACATCGCG AACCTCGCGA TCATCGGCTC GATCATGATC CGCCATGACC ACGGTGCGCA CTTCTGGGGG CTGATCCTGC CCCACGGGCT GCTCGAGCTG ACCGCGGTGT TCGTCGCCGG CGGCGTCGGC CTGCGGCTGT TCTGGTCCTG GGTGGAGCCC GGTCCGCTGA CCCGTACCCA GGCGCTGGCG CGGGAGGGCC GCACCGCCGG CACCGTCGCC CTCGGCCTGG TCGCCGTGCT GCTCGTCAGC GGCCTGATCG AGGCGTTCGT GACTCCCTCC GGCCTGCCGA CCTGGGCCCG CGTCGGCATC GGCGTCCTCG CCGAGGCGGT GTTCCTCTCC TACGTGTTCG TGCTCGGCCG CGACGCCGTC CGTCGTGGCC ACACCGGCGA CCTCGACCCC GCCCTCCTCG AGGACCGGGT CACCAGCGAG GCCTGA
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Protein sequence | MDLDAYVGAH ASEWRRLEEL TRKHRLTGAE ADELVERYQR VATHLSVVRT SAPDATVVAH LSALLSRARN RATGTRTSTW RGVRLFFVDR FPAALYRLRW WWLGTLAANV AVTAVMMLWL LDHPAVEQSL LSPEQVDQLV AHDFEDYYSE YAASHFAAQV WVNNAWVAAL CLALGVLGVP VVYLLFQNIA NLAIIGSIMI RHDHGAHFWG LILPHGLLEL TAVFVAGGVG LRLFWSWVEP GPLTRTQALA REGRTAGTVA LGLVAVLLVS GLIEAFVTPS GLPTWARVGI GVLAEAVFLS YVFVLGRDAV RRGHTGDLDP ALLEDRVTSE A
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