Gene Noca_3911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3911 
Symbol 
ID4598046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4115845 
End bp4117137 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content78% 
IMG OID639778517 
Producthypothetical protein 
Protein accessionYP_925096 
Protein GI119718131 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0824882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATCT CCGGCCGGGT CCCGCTGCTG CTGCTCCTCG GGGTAGCGGC CGTGCTGCTG 
CGCCCGGGGA TGGGGACGGT CTGGCTGTGG GTGCTCGCGG TCGCGCTCCT GGTGGCCGCC
GACCTGCTGC TGGCGCCCGC ACCCGAGCGG CTCTCCTTCG AGCGGCCGGC GGTCGGGACG
GTGCTTCTGG GGCAGCCGAC CGAGACCCGG CTGGTCGCGT GCAACGTGTC GCGACGCCGG
GTCCGGGGCA CCCTGCGGGA CGCGTGGCAG CCGTCGGCCG GCGCGACCGG CAACCGGCAC
CGGCTCGCCC TCGGGCCGGG TGACCGGGTG GAGCTGCGCA CGGCACTGCT GCCGGTGCGG
CGGGGGGACC TGCGCGCCCT GGGCGTCACC GTGCGCCTGC GGGGTCCGCT GGGGCTGGCC
GCGCGCCAAC GCACCCGCGT CGTCGACGGG GCGGTCCGCT CGCTGCCGCC GTTCGACTCC
CGCAAGCACC TGCCCAGCAG GCTGGCCCGG CTGCGGGACC TGGACGGCCG CGCCGCGGTG
CGGGTGCGCG GCGCCGGCAC CGAGTTCGAC TCGCTGCGCG AGTACGTGCG CGGCGACGAC
GTACGCTCCA TCGACTGGCG CGCGAGCGCG CGCAACCGTG CGGTCGTGGT CCGCACCTGG
CAGCCCGAGC GCGACCGTCG AGTGGTGCTC GTGCTCGACA CCTCACGGAC CTCGGCCGGA
CGGGTCGGCG ACGTCCCCCG CCTCGACTCC GCGATGGACG CCGCCTTGCT GCTCGCGGCG
CTCGCCGCCC GGGCCGGCGA CCGCGTCGAC TTCGTGGCCG GCGACCGTCG GGTCCGGGCC
CGGCTCCGCT CCGCCGGCGC CCGCGACGTC GCCGCGCGGC TCCAGGACGC CATGGCCGAC
CTCGAGCCGC TGATCGCCGA GGCCGACTGG GACTCGCTCG CCGGCGCGGT CACCGCGCTG
GGCCGCCAGC GCGCGCTGGT CGTCCTCCTC ACCCCGCTCG AGCCGGCGGC GGTCGAGGAG
GGACTGCTCC CCGTCCTGCC GACGCTCACC AAGCACCACC GGGTGGTGCT CGCCTCGGTC
CGCGACCCCG CGCTGGAGCA GCTCGCCGCC GCGCGCGGCA CCCTCGACGA GGTGTACGAC
GCCGCCGCGG CCGAGCAGGT CCTCGGCCGG CGCCGCCGTA CCGCCGGGCT GCTGCGCACG
CTCGGCGTGG ACGTGGTGGA CGCCGACGCC GAGCAGCTGC CGCCCGCCCT GGCCGACCAC
TACCTGAGCC TCAAGGCGCG CGGGCTGCTC TGA
 
Protein sequence
MAISGRVPLL LLLGVAAVLL RPGMGTVWLW VLAVALLVAA DLLLAPAPER LSFERPAVGT 
VLLGQPTETR LVACNVSRRR VRGTLRDAWQ PSAGATGNRH RLALGPGDRV ELRTALLPVR
RGDLRALGVT VRLRGPLGLA ARQRTRVVDG AVRSLPPFDS RKHLPSRLAR LRDLDGRAAV
RVRGAGTEFD SLREYVRGDD VRSIDWRASA RNRAVVVRTW QPERDRRVVL VLDTSRTSAG
RVGDVPRLDS AMDAALLLAA LAARAGDRVD FVAGDRRVRA RLRSAGARDV AARLQDAMAD
LEPLIAEADW DSLAGAVTAL GRQRALVVLL TPLEPAAVEE GLLPVLPTLT KHHRVVLASV
RDPALEQLAA ARGTLDEVYD AAAAEQVLGR RRRTAGLLRT LGVDVVDADA EQLPPALADH
YLSLKARGLL