Gene Noca_3815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3815 
Symbol 
ID4595880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4035388 
End bp4035744 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content75% 
IMG OID639778423 
Productpeptidoglycan-binding LysM 
Protein accessionYP_925002 
Protein GI119718037 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.473827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACGA TGACGATTCC CGCCCACCCG GCTCGGGTGG TGCGCTCCGC AGCCGCCCGC 
CGCGGCGCGG TCCGGCTGAC CCGCCGTGGC CGCCTGGTGG TGCTCGCGGT CGCGGTGCTC
GCGATCCTGG CGATCGGCTT CGTGCTGGCC GGCGGCTCGG TCGCCACCGG CGAGTCGGGC
CACCCGGAGC CCACCCGCGT GGTGATGGTC GGCACCGGCG ACACGCTCTG GGACATCGCC
GCCGGCCTCT CCGACGACGG CGACGTGCGC GCGATGGTCG ACCGGATCCA GCGGCTCAAC
GCCCTCGACT CCGGCATGGT CGTCGCCGGC CAGCGCCTCC TGGTGCCGGT GGAGTAG
 
Protein sequence
MSTMTIPAHP ARVVRSAAAR RGAVRLTRRG RLVVLAVAVL AILAIGFVLA GGSVATGESG 
HPEPTRVVMV GTGDTLWDIA AGLSDDGDVR AMVDRIQRLN ALDSGMVVAG QRLLVPVE