| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3653 |
|---|
| Symbol | |
|---|
| ID | 4595765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 3877396 |
|---|
| End bp | 3878814 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 639778261 |
|---|
| Product | 2-nitropropane dioxygenase, NPD |
|---|
| Protein accession | YP_924840 |
|---|
| Protein GI | 119717875 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.042009 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGGTA CGACACCGTC CATCATCCAA GGTGGGATGG GGGTCGGCGT CTCGTCCTGG
CAGCTCGCCC GGTCCGTGGC CCTGGCCGGC CACCTCGGCG TGGTCTCCGG TACGGCGCTC
GACGCGACGC TCGCCCGCCG GCTGCAGGAC GGCGACCCGG ACGGGCACGC CCGGCGCGCC
CTGGCCGCGT TCCCCGACCA GGCGATGGTC GCCCGGGCGC TCGACCGCTA CCACCTCCCC
GAGGGCCGGA CGCCGGGCCG CCCGTACCGG CCGACGCCGA AGCCGTCGCT GCGGCCCAGC
CGGCACGCCC AGGAGCTGGC CGTCCTCGGC AACTTCGCCG AGGTGTGGCT GGCCAAGCAG
GGCCACGAGG GGACCGTCGG CATCAACTTC CTCGAGAAGA TCCAGCTGGC CACGCCCGCG
GCCGCGCTCG GCGCGATGCT CGCCGGGGTG GACGTCGTCC TGATGGGGGC CGGGGTGCCC
CGGGAGATCC CGCAGCTGCT CACCGACCTC GCGCGCGGCG ACGTCGGGGG GATCGGCGTC
GACGTGCACG GCGCACCCGA GCGGTCGCGG ATCGAGGTCG ACCCGCGGGG CCTGCTCGGT
CGGCACCTGC CGCCGCTGCG CCGGCCGCGG TTCCTGGCCA TCGTGTCCGC GACCGTCCTG
GCCGCCTACC TTGCCCGCGA CGACGCGACC CGGCCCGACG GGTTCGTGAT CGAGGGTCCG
GTCGCGGGCG GCCACAACGC GCCGCCACGC GGGACGCTCG TGGTCGACGA CGACGGGGAG
CCCGTGTACG GCGACCGCGA CGCGGTCGAC CTCGCCAAGG TCGCGGCCCT CGGCCTGCCG
TTCTGGCTGG CGGGCGGGCA CGGGACGCCC GAGGGCCTGC AGTCGGCCCG CGCCGCCGGG
GCTGCCGGCA TCCAGGTCGG GACGCTGTTC GCGCTCGCCG CAGAGTCGGG ACTGCGCCCC
GAGCTGCGTG AGCAGGTCGG CGCCCAGCTC GGCGCCGGGA CGCTGCGGGT ACGGACCGAC
GTGCGCTCCT CGCCGACCGG CTTCCCGTTC AAGGTCGCCC GGATCGAGGG CACGCTCTCC
GAGTCCGAGG TGTACGAGGA CCGCGAGCGG CTGTGCGACC TGGGCTACCT GCGCACGCCG
TACCTCACCG CGGCGGGCCG GATCGGGTAC CGGTGCCCGG GCGAGCCGGT GGCGGTCTAC
CAGCGCAAGG GCGGCGACCT CGCCGACACG GTCGGCCGCA GGTGCCTGTG CAACGCGCTG
ACCGCCGACG TCGGCCTGGG ACAGACCCGC CCGGACGGCT ACCGGGAGCC GGGCCTGATC
ACGCTCGGGA GCGACCTCAG CGGCCCGCGC CGCCTGCTCG AGCGCCATCC GGGCGGCTGG
ACGGCCGGGC AGGCGGTGGC CTGGCTGGAG GGCCGATGA
|
|---|
| Protein sequence | MPGTTPSIIQ GGMGVGVSSW QLARSVALAG HLGVVSGTAL DATLARRLQD GDPDGHARRA
LAAFPDQAMV ARALDRYHLP EGRTPGRPYR PTPKPSLRPS RHAQELAVLG NFAEVWLAKQ
GHEGTVGINF LEKIQLATPA AALGAMLAGV DVVLMGAGVP REIPQLLTDL ARGDVGGIGV
DVHGAPERSR IEVDPRGLLG RHLPPLRRPR FLAIVSATVL AAYLARDDAT RPDGFVIEGP
VAGGHNAPPR GTLVVDDDGE PVYGDRDAVD LAKVAALGLP FWLAGGHGTP EGLQSARAAG
AAGIQVGTLF ALAAESGLRP ELREQVGAQL GAGTLRVRTD VRSSPTGFPF KVARIEGTLS
ESEVYEDRER LCDLGYLRTP YLTAAGRIGY RCPGEPVAVY QRKGGDLADT VGRRCLCNAL
TADVGLGQTR PDGYREPGLI TLGSDLSGPR RLLERHPGGW TAGQAVAWLE GR
|
|---|
| |