Gene Noca_3555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3555 
Symbol 
ID4599434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3769920 
End bp3771770 
Gene Length1851 bp 
Protein Length616 aa 
Translation table11 
GC content73% 
IMG OID639778163 
Producthypothetical protein 
Protein accessionYP_924742 
Protein GI119717777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.507708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGTC GGCGTCGAGT TGCACATGAG CAGGCACTCC GGCAGAGGGT GGCTCGGGCC 
AAGGAGCATC GGCGCCGGGC CCGGCTGAGC CGCGCCGCGG GCGCCGCGAC CGTGGCCGCC
GTCGGCCTGT CCGGCCTGAC GGCGCCGGCG CTCGCCACCC CGACGAGCAC CGCGAGCGCC
TCGGGCACCC TGGGCGCCAC CAGCGCGCCG GTGCAGTGCG GTGGCGATGT CCCCACCCCG
GCGAGCTCGC CGTACCAGAT CACCCAGGTC GGTGACGCCC TCTTCTTCCT GGCCGACGAC
GGGGTCCACG GCCGGGAGCT GTGGACCTCG GACGGGACCG CGGCCGGAAC CGTCCTGGTC
AAGGACCTCA CCCAGGGTGA CGGCTACTAC GACCATGCGT CGCAGCTGAC CGCCGTGGGC
GCGACCCTGT TCTTCACCGC CGACGACGGT GAGCACGGCC GGGAGCTGTG GAGGTCCGAC
GGGACCGCGG CCGGGACCGT GCTGGTCAGG GACATCGATC CCGAGGACGG GTCGTACTAC
GGCGGGCCGG CGTCCCTCAC CGCGGTGGGC GACGCGCTGT TCTTCACCGC CGACGACGGC
ACGCACGGCC GCGAGCTGTG GCGCTCGGAC GGCACCCGAC GCGGCACCGT CCGGGTCACC
GACCTCCCCT CGGAGGGCGG GTACTACGAC CGCGGCCCGG TCGGCCTGAC CGCCGTGGGT
GACACGCTGT TCTTCACCGC CGACGACGGC ACGCACGGCC GCGAGCTCTG GACCTCGGAC
GGCACCCGTG CCGGGACGGC GATGCTCAAG GAGATCCGAG CCGGTGAGTA CGGCGGCTCG
CCCAGCGACT TCACGGCGAA CGGGGACACG GTGTTCTTCA CCGCCCGGGA CGGCGTCCAC
GGGGCCGAGC TGTGGAAGTC GGACGGGACC GCCGCGGGAA CGCAGCTGGT CAAGGACGTC
GACCCCGGGG CCGGTTCCGC CCGGCCCGGC TACCTGACCG AGGCCGGCGG GACCCTGTTC
TTCAGCGCCG ACGACGGCGA GCACGGCCGG GCGCTCTGGA AGTCGGACGG CTCCGCGGCC
GGCACGGTCC TGGTCAAGGA CATCGACCCG AGTGACGAGT CCTACTACGA AGCCACCAGC
CTGACCGACG TCGGCGGGAC CCTCTTCTTC CGCGCCGACG ACGGCGTCCA CGGGCAGGAG
CTGTGGCGCT CGGACGGCTC CGAGGCGGGC ACCGTGATGG TCAAGGACAT CAACCCCGAC
CTCTACAGCA GCACGCCGTA CTGGCTGGTC GACGCGGCCG GCACACTGTT CTTCACCGCG
GGCGATGGCT TCCACGGGCG GGAGCTGTGG ACCTCCGACG GCACCGAGTC CGGCACCACG
ATGGTCAAGG ACATACAGCC GTCGGGCGTC TCCTACAGCC CGACCTCCCT CGCCGCCGTC
GGCGGGACCG TCTACTTCCG CGCGGACGAC GGCCGGCACG GCAGCGAGCT CTGGAGGTCC
GACGGCACCG CCGCCGGCAC CGCCATGGTC GCGGACATCA ACAAGGGCGG CGGGTTCGCC
GTCCAGTCCG ACGGCAAGGC CGACACCCGG GCCGGCACGC TGCGCCTGAA GGTTTCGGTC
CAGGGCGCCG GAACCCTGAC GGTGGCCCCG GCAGCCGGGT CGGAGATCCG GCGGTCGACC
ACCGACGTGA CCGAGGCCGG CACGACCACC GTGACCCTGC GGCCCACCCG GGCCGGCCTG
CGCGCGCTGC GGAAGGACGG CGAGCTGCGG GTCCTGGCGC GGTTCACGTT CACCCCGTGC
GGCGGAGCCG GCAACGGCGT GGTCCACAGG TACACGCTGA GGCTGCGTTG A
 
Protein sequence
MSRRRRVAHE QALRQRVARA KEHRRRARLS RAAGAATVAA VGLSGLTAPA LATPTSTASA 
SGTLGATSAP VQCGGDVPTP ASSPYQITQV GDALFFLADD GVHGRELWTS DGTAAGTVLV
KDLTQGDGYY DHASQLTAVG ATLFFTADDG EHGRELWRSD GTAAGTVLVR DIDPEDGSYY
GGPASLTAVG DALFFTADDG THGRELWRSD GTRRGTVRVT DLPSEGGYYD RGPVGLTAVG
DTLFFTADDG THGRELWTSD GTRAGTAMLK EIRAGEYGGS PSDFTANGDT VFFTARDGVH
GAELWKSDGT AAGTQLVKDV DPGAGSARPG YLTEAGGTLF FSADDGEHGR ALWKSDGSAA
GTVLVKDIDP SDESYYEATS LTDVGGTLFF RADDGVHGQE LWRSDGSEAG TVMVKDINPD
LYSSTPYWLV DAAGTLFFTA GDGFHGRELW TSDGTESGTT MVKDIQPSGV SYSPTSLAAV
GGTVYFRADD GRHGSELWRS DGTAAGTAMV ADINKGGGFA VQSDGKADTR AGTLRLKVSV
QGAGTLTVAP AAGSEIRRST TDVTEAGTTT VTLRPTRAGL RALRKDGELR VLARFTFTPC
GGAGNGVVHR YTLRLR