Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3555 |
Symbol | |
ID | 4599434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3769920 |
End bp | 3771770 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639778163 |
Product | hypothetical protein |
Protein accession | YP_924742 |
Protein GI | 119717777 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.507708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTCGTC GGCGTCGAGT TGCACATGAG CAGGCACTCC GGCAGAGGGT GGCTCGGGCC AAGGAGCATC GGCGCCGGGC CCGGCTGAGC CGCGCCGCGG GCGCCGCGAC CGTGGCCGCC GTCGGCCTGT CCGGCCTGAC GGCGCCGGCG CTCGCCACCC CGACGAGCAC CGCGAGCGCC TCGGGCACCC TGGGCGCCAC CAGCGCGCCG GTGCAGTGCG GTGGCGATGT CCCCACCCCG GCGAGCTCGC CGTACCAGAT CACCCAGGTC GGTGACGCCC TCTTCTTCCT GGCCGACGAC GGGGTCCACG GCCGGGAGCT GTGGACCTCG GACGGGACCG CGGCCGGAAC CGTCCTGGTC AAGGACCTCA CCCAGGGTGA CGGCTACTAC GACCATGCGT CGCAGCTGAC CGCCGTGGGC GCGACCCTGT TCTTCACCGC CGACGACGGT GAGCACGGCC GGGAGCTGTG GAGGTCCGAC GGGACCGCGG CCGGGACCGT GCTGGTCAGG GACATCGATC CCGAGGACGG GTCGTACTAC GGCGGGCCGG CGTCCCTCAC CGCGGTGGGC GACGCGCTGT TCTTCACCGC CGACGACGGC ACGCACGGCC GCGAGCTGTG GCGCTCGGAC GGCACCCGAC GCGGCACCGT CCGGGTCACC GACCTCCCCT CGGAGGGCGG GTACTACGAC CGCGGCCCGG TCGGCCTGAC CGCCGTGGGT GACACGCTGT TCTTCACCGC CGACGACGGC ACGCACGGCC GCGAGCTCTG GACCTCGGAC GGCACCCGTG CCGGGACGGC GATGCTCAAG GAGATCCGAG CCGGTGAGTA CGGCGGCTCG CCCAGCGACT TCACGGCGAA CGGGGACACG GTGTTCTTCA CCGCCCGGGA CGGCGTCCAC GGGGCCGAGC TGTGGAAGTC GGACGGGACC GCCGCGGGAA CGCAGCTGGT CAAGGACGTC GACCCCGGGG CCGGTTCCGC CCGGCCCGGC TACCTGACCG AGGCCGGCGG GACCCTGTTC TTCAGCGCCG ACGACGGCGA GCACGGCCGG GCGCTCTGGA AGTCGGACGG CTCCGCGGCC GGCACGGTCC TGGTCAAGGA CATCGACCCG AGTGACGAGT CCTACTACGA AGCCACCAGC CTGACCGACG TCGGCGGGAC CCTCTTCTTC CGCGCCGACG ACGGCGTCCA CGGGCAGGAG CTGTGGCGCT CGGACGGCTC CGAGGCGGGC ACCGTGATGG TCAAGGACAT CAACCCCGAC CTCTACAGCA GCACGCCGTA CTGGCTGGTC GACGCGGCCG GCACACTGTT CTTCACCGCG GGCGATGGCT TCCACGGGCG GGAGCTGTGG ACCTCCGACG GCACCGAGTC CGGCACCACG ATGGTCAAGG ACATACAGCC GTCGGGCGTC TCCTACAGCC CGACCTCCCT CGCCGCCGTC GGCGGGACCG TCTACTTCCG CGCGGACGAC GGCCGGCACG GCAGCGAGCT CTGGAGGTCC GACGGCACCG CCGCCGGCAC CGCCATGGTC GCGGACATCA ACAAGGGCGG CGGGTTCGCC GTCCAGTCCG ACGGCAAGGC CGACACCCGG GCCGGCACGC TGCGCCTGAA GGTTTCGGTC CAGGGCGCCG GAACCCTGAC GGTGGCCCCG GCAGCCGGGT CGGAGATCCG GCGGTCGACC ACCGACGTGA CCGAGGCCGG CACGACCACC GTGACCCTGC GGCCCACCCG GGCCGGCCTG CGCGCGCTGC GGAAGGACGG CGAGCTGCGG GTCCTGGCGC GGTTCACGTT CACCCCGTGC GGCGGAGCCG GCAACGGCGT GGTCCACAGG TACACGCTGA GGCTGCGTTG A
|
Protein sequence | MSRRRRVAHE QALRQRVARA KEHRRRARLS RAAGAATVAA VGLSGLTAPA LATPTSTASA SGTLGATSAP VQCGGDVPTP ASSPYQITQV GDALFFLADD GVHGRELWTS DGTAAGTVLV KDLTQGDGYY DHASQLTAVG ATLFFTADDG EHGRELWRSD GTAAGTVLVR DIDPEDGSYY GGPASLTAVG DALFFTADDG THGRELWRSD GTRRGTVRVT DLPSEGGYYD RGPVGLTAVG DTLFFTADDG THGRELWTSD GTRAGTAMLK EIRAGEYGGS PSDFTANGDT VFFTARDGVH GAELWKSDGT AAGTQLVKDV DPGAGSARPG YLTEAGGTLF FSADDGEHGR ALWKSDGSAA GTVLVKDIDP SDESYYEATS LTDVGGTLFF RADDGVHGQE LWRSDGSEAG TVMVKDINPD LYSSTPYWLV DAAGTLFFTA GDGFHGRELW TSDGTESGTT MVKDIQPSGV SYSPTSLAAV GGTVYFRADD GRHGSELWRS DGTAAGTAMV ADINKGGGFA VQSDGKADTR AGTLRLKVSV QGAGTLTVAP AAGSEIRRST TDVTEAGTTT VTLRPTRAGL RALRKDGELR VLARFTFTPC GGAGNGVVHR YTLRLR
|
| |