Gene Noca_3551 details

Gene Information

• Locus tag: Noca_3551
• ID: 4599430
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 3765409
• End bp: 3766110
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639778159
• Product: succinate dehydrogenase subunit C
• Protein accession: YP_924738
• Protein GI: 119717773
• TIGRFAM ID: [TIGR02046] succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCAACGA CGACCTTGGT CAAAGGGGCG CGAGCATCAC GCTCGACGAT CACCCTGAAG 
CTCTTGATGG CCGCCAGCGG CCTCCTCTTC ATCCTCTTCG TGCTCATGCA CATGTACGGG 
AACCTCAAGG CCTTCGGCGG CCATGACACG TACAACGAGT ACGCCGAGCA CCTGCGCACC 
TTCGGCGAGC CGATCCTGCC GCGCGAGGGC CTGCTGTGGA TCCTGCGCGT CGGACTCCTC 
GCCGCGCTGG TCCTGCACGT GTACAGCGCC CTCGCACTGT GGCACCGGGC CGGCAAGGCG 
CGGACCACGA AGTACGTGGT GAAGAAGAAC CTCGCGTCCA GCCTGTCCTC GCGGACCATG 
CGCTGGGGCG GCGTGGCGAT CCTGCTGTTC GTCGTCTGGC ACCTGATCAA CTTCACGATC 
GGGAAGGTCA ACGTGTCCGG TGGGGCCACC AACGACCCGT ACAACCTGCT TGTGGACTCG 
TTCAACTCCT GGTGGCTGAC GGTGATCTAC CTGGTCGCGA TGCTCGCGCT CGGTATGCAC 
CTGCAGCACG GTGTCTGGAG CGCCGCCCAG ACGCTCGGCC TCACCAACAA CGCCCGCGCA 
CGTCGCAACG CCAAGAGCCT CGGCTGGATC ATCGCCGTGG TGGTCGCGGG CGGGTTCTCC 
CTCGTGCCGA TCTTCGTCCT CGCCGGCGTC ATCGAGAAGT AA 

 

Protein sequence

MATTTLVKGA RASRSTITLK LLMAASGLLF ILFVLMHMYG NLKAFGGHDT YNEYAEHLRT 
FGEPILPREG LLWILRVGLL AALVLHVYSA LALWHRAGKA RTTKYVVKKN LASSLSSRTM 
RWGGVAILLF VVWHLINFTI GKVNVSGGAT NDPYNLLVDS FNSWWLTVIY LVAMLALGMH 
LQHGVWSAAQ TLGLTNNARA RRNAKSLGWI IAVVVAGGFS LVPIFVLAGV IEK