Gene Noca_3517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3517 
Symbol 
ID4595699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3728542 
End bp3729939 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content73% 
IMG OID639778125 
Productflavoprotein disulfide reductase 
Protein accessionYP_924704 
Protein GI119717739 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0548483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGCC AGCGCGTCGT CATCATCGGC GGTGGCCCCG GCGGCTACGA GGCGGCCCAC 
GTCGCGGCCC AGCTCGGTGC CGAGGTCACG ATCGTCGACA CCGACGGGGT CGGTGGCTCT
GCGGTGCTCA CCGACTGCGT GCCGAGCAAG ACCCTGATCG CGACGGCGGA GGTGATGAGC
GACCTCGCCG ACGCGGCCGA GCTCGGCGTG ACGTTCGCCG ACGCCGAGGG CGACGTGGCC
ACGTCGATCC GGGTCGACCT CGCGACGGTC AACGCGCGGG TCAAGCGGCT CGCCGCCGCC
CAGTCCGCCG ACATCGGCCG GCGGCTGGAC CGCGACGGCG TCACCGTGCT CCGCGGCCGC
GGCAGCCTGG TCGGTCCCGA CCGGGTGCTG GCCCGGCTCG CCGACGGCAC CGAGCAGGTG
CTCGAGGCCG ACGCGATCCT GCTCGCCACC GGCGCCGCCC CGCGCACGCT GCCCACCGCG
CAGCCGGACG GCGAGCGGAT CCTCACCTGG GAGCAGGTCT ACGACCTCAC CGAGGTCCCC
ACCGAGCTGA TCGTCGTCGG CTCCGGCGTC ACCGGCGCCG AGTTCGCGAG CGCCTACCTC
AACCTCGGGA TCCCCGTCAC CCTCGTCTCC TCCCGCGATC ACGTCCTGCC CGGCGAGGAT
GCCGACGCCG CGAAGGTCCT CGAGGACGTC CTGACCCGCC GCGGCATGAC GGTCCTGGCC
CGCTCGCGCA TGGAGTCGGT GTCGCGCGAT GGCGACCGGG TCACGGTCAC GCTGACCGAC
GGGCGCACCG TCGAGGGTTC GCACTGCATC CTCGCGCTCG GGTCGGTGCC CAACACCGCG
GGCCTGGGCC TGGAGGAGGC GGGCGTGGTC CTCGATGACG GCGGCTTCGT CAACGTCGAC
CGGGTCTCCC GTACGTCGGC CCGCGGAATC TATGCCGCCG GCGACTGCAC CGGCGTGCTG
ATGCTGGCCA GCGTCGCCGC CATGCAGGGC CGGATCGCGA TGTGGCACTT CCTCGGCGAC
GCCGTGCAGC CCCTGGACCT GAAGACCGTG TCCTCGAACG TGTTCACGGC GCCCGAGATC
GCCACCGTGG GCTGGTCGCA GCGCGCCATG GAGGAAGGGG AGATCCTGGC CGAGGTCGTC
ATGCTGCCGA TGTCGGGCAA CCCCCGCGCG AAGATGCAGG GCGTCCGGGA CGGCTTCGTC
AAGCTGCTCT GCCGGCCCGG CACCCGCACC ATCGTCGGCG GCGTGGTCGT CGGCCCGCGG
GCCAGCGAGC TGATCCACCC GGTGGCGATC GCGGTCGCCG AGTCGCTGAC CGCCGACCAG
CTTGCCCAGG CCTTTACGGT GTATCCATCG ATGAGCGGCT CGATCGCCGA GGCCGCTCGC
CGCCTGCACC GCGCCTAG
 
Protein sequence
MTSQRVVIIG GGPGGYEAAH VAAQLGAEVT IVDTDGVGGS AVLTDCVPSK TLIATAEVMS 
DLADAAELGV TFADAEGDVA TSIRVDLATV NARVKRLAAA QSADIGRRLD RDGVTVLRGR
GSLVGPDRVL ARLADGTEQV LEADAILLAT GAAPRTLPTA QPDGERILTW EQVYDLTEVP
TELIVVGSGV TGAEFASAYL NLGIPVTLVS SRDHVLPGED ADAAKVLEDV LTRRGMTVLA
RSRMESVSRD GDRVTVTLTD GRTVEGSHCI LALGSVPNTA GLGLEEAGVV LDDGGFVNVD
RVSRTSARGI YAAGDCTGVL MLASVAAMQG RIAMWHFLGD AVQPLDLKTV SSNVFTAPEI
ATVGWSQRAM EEGEILAEVV MLPMSGNPRA KMQGVRDGFV KLLCRPGTRT IVGGVVVGPR
ASELIHPVAI AVAESLTADQ LAQAFTVYPS MSGSIAEAAR RLHRA