| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3445 |
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| Symbol | mnmA |
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| ID | 4597261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3652241 |
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| End bp | 3653341 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639778051 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_924632 |
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| Protein GI | 119717667 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.79228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGTCC TCGCCGCCAT GTCCGGCGGC GTCGACTCCG CGGTGGCCGC TGCGCGCGCG
GCCGAGGCGG GGCACGACGT CACCGGCATC CACCTCGCGC TCTCGCGCAA CCCGCAGTCC
TACCGCTCGG GCGCGCGCGG CTGCTGCACG ATCGAGGACA GCAACGACGC CAGGCGCGCC
GCCGACGTGA TCGGCATCCC GTTCTATGTC TGGGACCTGT CCGACCGGTT CCACGAGGAC
GTGGTCGAGG ACTTCATGGC CGAGTACGCC GCCGGCCGCA CGCCCAACCC GTGCCTGCGC
TGCAACGAGA AGATCAAGTT CGCCGCCGTC CTGGACCGCG CGCTCGGGCT GGGCTTCGAC
GCCGTCGCGA CCGGCCACTA CGCCCGCCTG GTGGCGGGCG CCGACGGTCT CGTCGAGATG
CACCGGGCCG TCGACCACGG CAAGGACCAG TCCTACGTGC TGGGCGTGCT CGACCAGGGC
CAGCTGCGCC ACTCGCTCTT CCCGCTCGGC GGGTCCACCA AGGACGAGGT CCGCCGCGAG
GCGGCCGAGC GGGGGCTGCT GGTCGCCGAC AAGCCGGACA GCCACGACAT CTGCTTCATC
GCCGACGGCG ACAACGCCGG CTGGCTGCGC GAGAAGCTCG GCGACCGTGC GCCCCACCAC
GAGGGCACGA TCGTCGACGA CGACACCGGC GAGGTGCTCG GTCGCCACGA GGGCAGCTAC
GGCTTCACGA TCGGCCAGCG CAAGGGCCTG CGGATCGGCC GGCCGGCCCC GGACGGCCGG
CCGCGCTTCG TGCTGGACAT CGAGCCGGTC TCGGGCACCG TCACCGTGGG CCCGCACGAG
CGGCTCGCCG TCCACCGGCT GCGCGGCATC CGCCCCCGCT GGTGCGGCAC CGTCCCCGAC
CGGCTGAGCG GCACGGTGCA GCTGCGCGCG CACGGCGAGG AGCACCGGGC CGTCCTGGTC
CGCGACGGCG ACGAGGTGGA CATCGAGCTG CTGGAGCCGG CGTACGGCAT CGCGCCGGGC
CAGGCCGCGG TCCTGTACGA CGGGAGCCGC GTCGTCGGCT CGGCCACGAT CTCCGCCACC
GACCGCGTGG CCGCGCGATG A
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| Protein sequence | MRVLAAMSGG VDSAVAAARA AEAGHDVTGI HLALSRNPQS YRSGARGCCT IEDSNDARRA
ADVIGIPFYV WDLSDRFHED VVEDFMAEYA AGRTPNPCLR CNEKIKFAAV LDRALGLGFD
AVATGHYARL VAGADGLVEM HRAVDHGKDQ SYVLGVLDQG QLRHSLFPLG GSTKDEVRRE
AAERGLLVAD KPDSHDICFI ADGDNAGWLR EKLGDRAPHH EGTIVDDDTG EVLGRHEGSY
GFTIGQRKGL RIGRPAPDGR PRFVLDIEPV SGTVTVGPHE RLAVHRLRGI RPRWCGTVPD
RLSGTVQLRA HGEEHRAVLV RDGDEVDIEL LEPAYGIAPG QAAVLYDGSR VVGSATISAT
DRVAAR
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