Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3417 |
Symbol | |
ID | 4598215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 3618735 |
End bp | 3619493 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639778023 |
Product | Asp/Glu racemase |
Protein accession | YP_924604 |
Protein GI | 119717639 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4126] Hydantoin racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCAAGA TCTTGGAGAT CGTCCCGGTT CCCGTACCCG AGGAGGCCTT GGCCGGCTTC CATGACATGG TCCCGACGCG GGCGATCTTC CCCGGCTTCG AGACCACGTT CGTCGCCACG CGCGCTGGCG CCGCCAACGC GATCGACAGC CCGTACGAGC AGACCCTGTG TGATGCCTTC GTCCTGGACG CCGGGTGCCG GGCAGAGGAG GAGGGGTACG ACGCCGTCTG TGTGAACTCG ATGAGCGACT CCGCGCTCTC CGCGCTCAGG TCTCGTCTGA CCATCCCCGT GGTGGCGCCG AGCCAGGCGT CGATGCTGGC GGCGTGCCTC CTCGGCAGGA CGTTCTCGGT GATCACCATG TGGCCGAACT GGCATTCGCT GTACCGCAAG GTCGCAGCCG AGCAGGGGCT GACCGGTCGC CTCGCGTCGA TCCGAGACAT CGGGGTCCGT CCCGACGCGG AGCAGTTGCT CGCGGGAAAA GAGGACTTCG TCTTCGATGT CCTGGAAGGA GCCTGCCGGG CCGCGATCGA CGAGGACGGG GCCGATGTCC TCATCCTCGG TTCGACAACC ATGCACCAGA GTCACGCGTA CCTGAGTGAG CACCTCGAGG TGCCGGTGCT CAACCCGGGC GTCATCGCCT ACAAGGCTGC CGAAACGCTG GTGCTCCTGG GCCTGTCGCA CAGCAAGGTG GCGTACCCGT CCCCCGAGAC GATCCAAGAC GACCTCCTGC GCTCGGTCCC GGCGACGTTT GCACGGTGA
|
Protein sequence | MPKILEIVPV PVPEEALAGF HDMVPTRAIF PGFETTFVAT RAGAANAIDS PYEQTLCDAF VLDAGCRAEE EGYDAVCVNS MSDSALSALR SRLTIPVVAP SQASMLAACL LGRTFSVITM WPNWHSLYRK VAAEQGLTGR LASIRDIGVR PDAEQLLAGK EDFVFDVLEG ACRAAIDEDG ADVLILGSTT MHQSHAYLSE HLEVPVLNPG VIAYKAAETL VLLGLSHSKV AYPSPETIQD DLLRSVPATF AR
|
| |