Gene Noca_3417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3417 
Symbol 
ID4598215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3618735 
End bp3619493 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content67% 
IMG OID639778023 
ProductAsp/Glu racemase 
Protein accessionYP_924604 
Protein GI119717639 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4126] Hydantoin racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAAGA TCTTGGAGAT CGTCCCGGTT CCCGTACCCG AGGAGGCCTT GGCCGGCTTC 
CATGACATGG TCCCGACGCG GGCGATCTTC CCCGGCTTCG AGACCACGTT CGTCGCCACG
CGCGCTGGCG CCGCCAACGC GATCGACAGC CCGTACGAGC AGACCCTGTG TGATGCCTTC
GTCCTGGACG CCGGGTGCCG GGCAGAGGAG GAGGGGTACG ACGCCGTCTG TGTGAACTCG
ATGAGCGACT CCGCGCTCTC CGCGCTCAGG TCTCGTCTGA CCATCCCCGT GGTGGCGCCG
AGCCAGGCGT CGATGCTGGC GGCGTGCCTC CTCGGCAGGA CGTTCTCGGT GATCACCATG
TGGCCGAACT GGCATTCGCT GTACCGCAAG GTCGCAGCCG AGCAGGGGCT GACCGGTCGC
CTCGCGTCGA TCCGAGACAT CGGGGTCCGT CCCGACGCGG AGCAGTTGCT CGCGGGAAAA
GAGGACTTCG TCTTCGATGT CCTGGAAGGA GCCTGCCGGG CCGCGATCGA CGAGGACGGG
GCCGATGTCC TCATCCTCGG TTCGACAACC ATGCACCAGA GTCACGCGTA CCTGAGTGAG
CACCTCGAGG TGCCGGTGCT CAACCCGGGC GTCATCGCCT ACAAGGCTGC CGAAACGCTG
GTGCTCCTGG GCCTGTCGCA CAGCAAGGTG GCGTACCCGT CCCCCGAGAC GATCCAAGAC
GACCTCCTGC GCTCGGTCCC GGCGACGTTT GCACGGTGA
 
Protein sequence
MPKILEIVPV PVPEEALAGF HDMVPTRAIF PGFETTFVAT RAGAANAIDS PYEQTLCDAF 
VLDAGCRAEE EGYDAVCVNS MSDSALSALR SRLTIPVVAP SQASMLAACL LGRTFSVITM
WPNWHSLYRK VAAEQGLTGR LASIRDIGVR PDAEQLLAGK EDFVFDVLEG ACRAAIDEDG
ADVLILGSTT MHQSHAYLSE HLEVPVLNPG VIAYKAAETL VLLGLSHSKV AYPSPETIQD
DLLRSVPATF AR