| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3338 |
|---|
| Symbol | |
|---|
| ID | 4600232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 3543251 |
|---|
| End bp | 3545620 |
|---|
| Gene Length | 2370 bp |
|---|
| Protein Length | 789 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639777946 |
|---|
| Product | peptidase S45, penicillin amidase |
|---|
| Protein accession | YP_924527 |
|---|
| Protein GI | 119717562 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2366] Protein related to penicillin acylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.378065 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGCCGA AGACCACTCG CGCCGGGGCC GCCCTGGCCA CCCTGCTCCT GCTCGCACCG
CTCTCCGCGG CCGCGACCTC CGCCGAGGCC GCCCCCGTCG CGGCCACACG GGCGGCGAAG
GCGCCGGCGT ACGACGTGAC GATCCGGATC ACCGAGCACG GCATCCCGCA CATCCGGTCG
AACACCCTGC CGGGCATGGC GTACGGCGCC GGCTGGATCA CCACGGCCGA GGCGACGTGC
AACCTGATGG ACACGCTGCT CACCGCGCGC GGGCAGCGCT CCCTCTACGA GGGCCCGGAC
GCCACCTACA AGGACAACGT CGGCGGCTCG GCCACGAACC TCGAGTGGGA CACGCTGGTC
ACCGACCTGC GCGACCGCGA GGTCGTGGAG CAGCTCCTCG CCGACCCGGT CGCCGGCCCC
AGTGGTCGGG CGAAGGCGAT GGTGGCCGCC GAGACCGCCG GCATCAACGC CTGGCTGGCC
GAGCACGAGA TCACCGACCC GGCCTGTGCG GACGAGGCGT GGATCGCGCC CGACGTCACG
ACCACCGACG TCTGGTACGC CTTCTACCTC GCGCAGCTGA TCTCCTCCAC GACCCGCCTG
CTCCCGCAGA TCGCCGACGC GGCGCCGCCG GCCGCCGGCG TGAAGCCCAC CGCGAGGCCG
ACGCGGGCGG AGCTGCGTGA GGCGCTCGAG CCCGACGCCG AGTTCGGGTC GAACGCCACC
GCGGTCGGCG GCGAGGACAC CTCCACCCGC CGCGGGATGA TCCTCGGCAA CCCGCACTTC
CCCTGGCTCG GCCGGTACCG CTTCACCCAG ATGCACCTGA CCGTCCCGGG CAAGCTGGAC
GTCGCCGGCG GCGCGCTGAC CGGCTTCCCG GCGATCAACA TCGGCTTCAA CAAGGACGTG
GCGTGGAGCC ACACCGTGTC GACCGGCTTC CGGTTCACGC CGTACCAGTA CACGACCGCC
GACACCCCCA CCAGCTACCG GACCGCCGAC GGCGGCACCG CCGAGCTCGA GCGGCGCGAC
GTCGACGTGC AGGTCCGGAC CGACGCCGGG GTCGAGACCG TGACCCGCAC CCTCTGGCGG
ACGCCGCAGG GCTACGTCCT CAACGCACCG AGCCTGTTCA TGGGCTGGAC CAAGGGCAGC
TTCTGGGCGT TCCGCGACGC GAACGCCGAG CACCTGCGCA CCTTCGACAC CTTCCTGGCG
ATGAACATGG CGAGCTCGGT GCGCAACCTG CTGCGCCGCC AGGACCGGGG CGGCGGCATG
CCGTGGGTCA ACACGGTCGC CGCCGACCGC GCCGGCGACG TCCTGTACGC CGACCACGCG
GTCACCCCGC ACGTCACCGA CGCCCTCGCG CGCCGGTGCA TGACCCCGGC CGGCCGGCTG
ATCTTCAGCG TCGCCGGGCT CCCCGGGCTC GACGGCACCC GGGCCAGCAC GGGCTGTGCG
TGGGGCACCG ACGAGGATGC CCAGCGCCCC GGCATCCTCG GCCCCTCGCA CCTGCCCGAG
GTCGTCCGCC GCGACTGGGT GATGAACGCC AACGACTCCT ACTGGCTGCC CAACGACGAG
GTGCGGCTGA CCGGCTACCC GCGGATCATC GGCTGCGAGG ACTGTGAGCG GACCATGCGC
ACGAAGGTCG TGATGGCCTA CGTGCGCGAC CGGTTGGAGG TCGGGAAGGA GACGCCGCGC
ACGCTGGCGG CGCACGAGCA CGCCAACCGG GTGTACGCCG CCGAGGTGGC CCGGGTCGGC
GGTCGGCTCG ACCGGGTCTG CGACGCCACC GGCCTGGTCG CCGCCTGCCG GCTGCTGCAC
GACTGGGACG GCCGCTCGGA CGCGACCTCC TCGGCCGGCG CCGCGATCTT CCAGGAGTTC
GTCCGGCTCG CGGACCAGCG CGACGTCGGC CTCTGGGAGG TGCCGTTCTC GCCCGCCCAC
CCGCTGACGA CGCCGCGCAC GCTGTCGACC GCGCAGCCCG TCGTCGACGC GCTGGCCGCG
GCGATCGCGC TGGTCACCGA CCGCGACGCC GGCCTGACCA AGACGTACGG CGAGCTCCAT
CGCTCGGGCG ACCGGGGCTC CGCCGGCTGG CCGCTCGGCG GCGGCCTCGG CGACCTGTCC
GGCGACGCGA ACGCGGTCAG CAGCACGCTC GGCGACCCGG TCCTCGACCC GGTCACCCGC
GGCTCGTCGT ACCTCCAGGC GGTCGCCTTC CGGGGCCGGA CCGGCGTCGA CGCGCGCACG
ATCCTCACCT ACAGCCAGTA CGAGGACCCG ACGTCCCGCT GGTCGGACGA CCAGACCGAG
ATGTTCTCGA ACGAGCAGTG GGTGCGCTTC CCGTGGACCG CCGCGCAGAT CCGCGACCAG
CTCGTGGAGG TCGTGCACCT GGCGCCCTGA
|
|---|
| Protein sequence | MQPKTTRAGA ALATLLLLAP LSAAATSAEA APVAATRAAK APAYDVTIRI TEHGIPHIRS
NTLPGMAYGA GWITTAEATC NLMDTLLTAR GQRSLYEGPD ATYKDNVGGS ATNLEWDTLV
TDLRDREVVE QLLADPVAGP SGRAKAMVAA ETAGINAWLA EHEITDPACA DEAWIAPDVT
TTDVWYAFYL AQLISSTTRL LPQIADAAPP AAGVKPTARP TRAELREALE PDAEFGSNAT
AVGGEDTSTR RGMILGNPHF PWLGRYRFTQ MHLTVPGKLD VAGGALTGFP AINIGFNKDV
AWSHTVSTGF RFTPYQYTTA DTPTSYRTAD GGTAELERRD VDVQVRTDAG VETVTRTLWR
TPQGYVLNAP SLFMGWTKGS FWAFRDANAE HLRTFDTFLA MNMASSVRNL LRRQDRGGGM
PWVNTVAADR AGDVLYADHA VTPHVTDALA RRCMTPAGRL IFSVAGLPGL DGTRASTGCA
WGTDEDAQRP GILGPSHLPE VVRRDWVMNA NDSYWLPNDE VRLTGYPRII GCEDCERTMR
TKVVMAYVRD RLEVGKETPR TLAAHEHANR VYAAEVARVG GRLDRVCDAT GLVAACRLLH
DWDGRSDATS SAGAAIFQEF VRLADQRDVG LWEVPFSPAH PLTTPRTLST AQPVVDALAA
AIALVTDRDA GLTKTYGELH RSGDRGSAGW PLGGGLGDLS GDANAVSSTL GDPVLDPVTR
GSSYLQAVAF RGRTGVDART ILTYSQYEDP TSRWSDDQTE MFSNEQWVRF PWTAAQIRDQ
LVEVVHLAP
|
|---|
| |