Gene Noca_3309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3309 
Symbol 
ID4600201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp3515972 
End bp3516550 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content68% 
IMG OID639777915 
Productperoxiredoxins-like 
Protein accessionYP_924498 
Protein GI119717533 
COG category[R] General function prediction only 
COG ID[COG2044] Predicted peroxiredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.268987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGACGC TCGATAGACG CCCTGGTATG CCTTCGCGCC GGACGCCTTG CCAGCGCACC 
CATCTGGTGA CGCTCGCGAC GCCGCAAATC GGTGGATCGA GGCTGAGGCG ATCTCGCCAT 
TTGTCGGGTG TTCGCCCGAC GACACCTCCC GTCGGCGCGC CTAGCGTCGT GGCACTCGAT 
CCGCCGCGAT GCAAGCCCGA TGCAAGGGAG TCCGTCATGA GCAAAGCAGT CATCAGCCTC 
ACCACCGGCC TGGAGGATCC GGAGAAGGTC GTCGTCGCGT TCCTCGTCGC GGTCGGCGCT 
GCGGAGACCG GCCGCGAGAC CCTGATGTTC CTGACCAAGG AGGCGGTCCG CCTGGCGGTC 
CCGGGGGTCG CCGTCGGGGT CGCCTGCGAC GGCTGCCCCT CGATCGAGGA GCTGGTCAAG 
CGGTACGACG CCGCGGGTGG CCGGTACTAC GTCTGCCCGA TCTGCGTGAA TGCCCGCCGG 
ATCGATCCCG ACGACCTCGT TCCTGGGGCG GAGATCAACG GCACCATCCC GATGTGGACC 
TGGATCGGCG ACGAGCCGGC CACGACGTTC AGCTACTGA
 
Protein sequence
MPTLDRRPGM PSRRTPCQRT HLVTLATPQI GGSRLRRSRH LSGVRPTTPP VGAPSVVALD 
PPRCKPDARE SVMSKAVISL TTGLEDPEKV VVAFLVAVGA AETGRETLMF LTKEAVRLAV 
PGVAVGVACD GCPSIEELVK RYDAAGGRYY VCPICVNARR IDPDDLVPGA EINGTIPMWT 
WIGDEPATTF SY