Gene Noca_3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3100 
Symbol 
ID4597885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3303631 
End bp3304473 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content74% 
IMG OID639777706 
Producthypothetical protein 
Protein accessionYP_924289 
Protein GI119717324 
COG category[S] Function unknown 
COG ID[COG3342] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTCT CGATCGTGGC CCGGTCCGCC GACGGTGAGT CCTGGGGCGT GGCCGTGGCC 
TCCAAGTTCC TCGCCGTCGG AGCCGCCGTC CCGGCGGCGG TGGCCGGGGT CGGCGCGATC
GCCACCCAGG CCGACGCCAA CGTCGCCTAC AAGGGCCAGG CGCTCGCGCA CCTCGACGAC
GGCGCCACCG CCTCCGTCGC CCTCCAACGG CTGCTGGAGG AGGACGACGG ACGCGAGCAC
CGCCAGGTCG GCATCGTCGA CGTGGACGGC AACGCGGCCA GTCACACCGG CGCGGACTGC
CTCGACTGGG CCGGCAGCCT GACCGGCGCC GGCTACGCCA TCCAGGGCAA CATCCTCACC
GGCTCCGAGG TCGTCGAGGC GATGGAGGCG GCCTGGCTCG CCGGGCCGCC GGACGCACCG
CTCGCGCACC TGCTGCTCGC AGCCTTGGCT GCGGGCGACG AGGCCGGCGG CGACTCGCGC
GGCCGCCAGT CGGCGGCGCT CCTGGTCGTC CGGGACGGCG CCGGGTACGG CGGCCTCGAC
GACATCGCCG TGGACCTGCG AGTCGACGAC CACGCGAGCC CGATCGCCGA GCTGACCCGG
CTGCTCGAGC TCAACGACCT CTACCTCACC GCGTCCACCG AGGAGGAGAA GGTCCCGGTC
ACTCCGGAGC TCGAGGCGGA GCTCGAGGAG CTGGCCCGCG CGGCCGGGGC CCGGGACCTC
CAGGCCTGGG TCGGCACCGA GAACTACGAG ATGCGGGTGG CGCCGGACGG GACCTGGATC
GACGTCAAGA TCCTGGAGAT CCTGCGCGGG ACCAGGGGCG GCGCCGGGGG TACCTCGGCA
TGA
 
Protein sequence
MTFSIVARSA DGESWGVAVA SKFLAVGAAV PAAVAGVGAI ATQADANVAY KGQALAHLDD 
GATASVALQR LLEEDDGREH RQVGIVDVDG NAASHTGADC LDWAGSLTGA GYAIQGNILT
GSEVVEAMEA AWLAGPPDAP LAHLLLAALA AGDEAGGDSR GRQSAALLVV RDGAGYGGLD
DIAVDLRVDD HASPIAELTR LLELNDLYLT ASTEEEKVPV TPELEAELEE LARAAGARDL
QAWVGTENYE MRVAPDGTWI DVKILEILRG TRGGAGGTSA