| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3067 |
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| Symbol | |
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| ID | 4600184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3265380 |
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| End bp | 3266765 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639777673 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_924256 |
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| Protein GI | 119717291 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0343626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCGAGA TGACACTGGG GAAGATCGCG AAGGTGGTCG GCGGCACGGT CGCCGGCGAC
CCCGACATCG TCGTCGACGC GCCGGCGTAC GTCGACTCCC GCCAGGCCGT GCCGGGCGGA
CTGTTCGTCG CCGTCGTGGG GGAGCACGTC GACGGCCACG ACTACGCCGC CGGCGCCCAT
GCGGTGCTCG GCAGCCGGCC GACCGAGGCG CCCACGATCG TCGTCCGCGA CCCGATCCCC
GCACTCGGCA AGCTGGCGGC GTACGTCGTC CGCCGGCTGG ACGCCACCGT GCTGGCCGTG
ACCGGCTCCC AGGGCAAGAC CGGCACCAAG GACTATCTCG CGCGGATCCT GTCCGCCGCC
GGGTCGACGG TGGCCACCTC CGGCAGCTTC AACAACGAGC TCGGCCTGCC GCTGACCGTG
CTGCGCGCTC ACCCGGAGAC GCGGTACCTC GTGCTGGAGA TGGGGGCGCG CCGGATCGGC
CACATCAAGC ACCTCTGCGA GATCGCGCCC CCGGACGTCG CTGCGGTCCT GAACGTCGGC
ACCGCCCACA TCGGCGAGTT CGGCAGCCGC GACTCGATCG CGTTCGCGAA GGGCGAGATC
GTGGCCGCGC TCCAGCCAGA GGGCACCGCG GTGCTGAACG CGGGCGACCC CCTGGTCGCC
GAGATGACGT CGCGGACCCG GGCCCGGGTG CTCACCTGGG GGCCGGACGA CGCCGACGTG
AGCGAGCGCG GCAGCGAGGT CGACGACCTC GGGCGGCCGT CGTTCGAGAT CGGGTACGAC
GACGAGTGGT ACCCGGTCCG GCTCCAGCAG TCCGGTCTGC ACCAGGCCCA GAACGCGCTC
GCCGCCGCGA CCATGGCGCT GGCCGTCGGC ATCCCGCTCG CGGACATCGC GGCCGGCCTG
TCGGCCGCGA CCGCGTCCTC GCCGATGCGG ATGGAGGTGC ACGAGCGCGC CGACGGGCTG
ATCGTCGTCA ACGACGCCTA CAACGCCAAC CCCGCCTCCG TCGTCGCCGC GCTCGAGTCC
CTGGCCGTCA TCGGCCGGCG CCGGCACCGC CGTACCGTCG CCGTGCTCGG GGAGATGCTC
GAGCTCGGCC GCGAGTCCTT CGACGGGCAC GTCCGCGTCG GCCGGGCGGC CGCCCGGCTC
GGCACCGACA TCGTCGTCGT CGTGGGTGCG GCCGCCGGCG GGATCGTCGA GGGGCTCGAG
GCGGTCGCCG CCTGGCGTGG CGATGGCGTC GTGGCGGAGG AGGTCGAAGA GGCCCTCGAG
TGGGTACGCG AGAATGTCCT GTCCGGTGAC GTGGTCCTGG TCAAGGCGTC GCACGGCGTC
GCCTTGTGGG AGGTCGCGGA CGCACTGCTC GACACCGACC CGGAGGGAGA CCGAACCGAG
CCATGA
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| Protein sequence | MLEMTLGKIA KVVGGTVAGD PDIVVDAPAY VDSRQAVPGG LFVAVVGEHV DGHDYAAGAH
AVLGSRPTEA PTIVVRDPIP ALGKLAAYVV RRLDATVLAV TGSQGKTGTK DYLARILSAA
GSTVATSGSF NNELGLPLTV LRAHPETRYL VLEMGARRIG HIKHLCEIAP PDVAAVLNVG
TAHIGEFGSR DSIAFAKGEI VAALQPEGTA VLNAGDPLVA EMTSRTRARV LTWGPDDADV
SERGSEVDDL GRPSFEIGYD DEWYPVRLQQ SGLHQAQNAL AAATMALAVG IPLADIAAGL
SAATASSPMR MEVHERADGL IVVNDAYNAN PASVVAALES LAVIGRRRHR RTVAVLGEML
ELGRESFDGH VRVGRAAARL GTDIVVVVGA AAGGIVEGLE AVAAWRGDGV VAEEVEEALE
WVRENVLSGD VVLVKASHGV ALWEVADALL DTDPEGDRTE P
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