| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3065 |
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| Symbol | murD |
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| ID | 4600182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3262823 |
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| End bp | 3264289 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639777671 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_924254 |
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| Protein GI | 119717289 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.149852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTCG ATCACCTCGG TCGTCACGAC TCCTGGGAAG GGGTCCGCGC CGTCGTCGCC
GGCTTCGGCG TCTCCGGCTT CGCGGCCGCC GACAACCTCA ACCACCTCGG TGCGAGCGTG
ACCGCCCTCG ACGAGTCCGA GGCCGGCGAT CGGCCCGCCA AGGCCGAGCT GCTCGAGGTG
CTCGGCGCCG ACGTACGCCT CGGGGCCGGC ACCACCACGA CCCTGCCCGA GGACGTGGAC
CTGCTGGTCA CCTCGCCCGG CTGGAAGCCG AGCGCGCCGC TGCTCGCGCA GGCCCGCGCG
CGCAGGATCC CCATCTGGGG CGAGGTCGAG CTGGCCTGGC GGCTGCGCGA CCCCGACCAC
CGCACCCCCT GGCTGTGCGT GACCGGCACG AACGGCAAGA CCACCACCGT GCAGATGCTC
GACTCGATCC TGCGGGCCGC CGGCCTGCGC AGCATCGCGG TCGGCAACGT CGGCCTCCCG
ATCGTCGAGG CCGTGATGGA CCCCGAGCCG TACGACGTGC TGGCCGTCGA GCTGTCCAGC
TTCCAGCTGC ACTACACCGA CTCGATGAGC GCCGAGGCGG CCGCGGTGCT CAACGTCGCC
GAGGACCACC TGGACTGGTA CTCCTCCTTC GGGGCCTATG CCGCCGACAA GGGCCGGATC
TACGAGCGGG CCCAGAAGGC CTGCGTCTAC AACGTCGCCG ACCCCGAGAC CGAGCGGCTG
GTCCGCGAGG CCGACGTGGT CGAGGGCGCC CGCGCCGTCG GGTTCACCCT CGGCATGCCC
GGCGTCGGCA TGGTGGGCCT GGTCGAGGAC ATCCTGGCCG ACCGGGCCTT CATCGAGCAG
CGCGACACCA GCGCCGCGGA GCTGTGCACG ATCTCCGACC TGGCCCTGCA CTCGCCGGGC
GGTGCGGCGC CCCACAACAT CGCCAACGCG CTCGCCGCCG CCGCCCTGGC CCGCGCCCAC
GGCGTCTCCC AGGGCGCGGT CCGCGACGGG CTGCGCGCCT TCCGCCCCGA CCGGCACCGG
ATCGCCGTCG TCGGCGCGGC CGGCGGCGTG ACCTGGGTCG ACGACTCCAA GGCCACCAAC
CCGCATGCCG CCCAGTCCTC GCTGCTGGCC TACGAGCCGG TGGTGTGGAT CGCCGGCGGG
CTCGCCAAGG GGGCCCACTT CGACGACCTG GTGCGCGCCG TGCGCGACCG GCTGCGCGGC
GTGGTGCTGC TCGGCCGCGA CCGGGACGTC ATCGCGGGGG CGCTTTCGCG ACACGCGCCG
GATGTGCCCG TCATCGTCGT CGAGGACGAC GAGACTGAGG GCGATCACGG TGGACGTGCC
ATGGAGCGCG TAGTCGGAGC GGCGGCCGAG TTGGCCCGAC CCGGCGACAC GGTCCTGCTG
GCACCCGGCT GCGCCTCCAT GGACATGTTC ACCAACTACG CCGAGCGCGG CGACGCGTTC
GCCGACGCCG TACGACGCAG GCTGTAG
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| Protein sequence | MDLDHLGRHD SWEGVRAVVA GFGVSGFAAA DNLNHLGASV TALDESEAGD RPAKAELLEV
LGADVRLGAG TTTTLPEDVD LLVTSPGWKP SAPLLAQARA RRIPIWGEVE LAWRLRDPDH
RTPWLCVTGT NGKTTTVQML DSILRAAGLR SIAVGNVGLP IVEAVMDPEP YDVLAVELSS
FQLHYTDSMS AEAAAVLNVA EDHLDWYSSF GAYAADKGRI YERAQKACVY NVADPETERL
VREADVVEGA RAVGFTLGMP GVGMVGLVED ILADRAFIEQ RDTSAAELCT ISDLALHSPG
GAAPHNIANA LAAAALARAH GVSQGAVRDG LRAFRPDRHR IAVVGAAGGV TWVDDSKATN
PHAAQSSLLA YEPVVWIAGG LAKGAHFDDL VRAVRDRLRG VVLLGRDRDV IAGALSRHAP
DVPVIVVEDD ETEGDHGGRA MERVVGAAAE LARPGDTVLL APGCASMDMF TNYAERGDAF
ADAVRRRL
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