| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2819 |
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| Symbol | |
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| ID | 4596109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 2988063 |
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| End bp | 2989331 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639777424 |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_924008 |
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| Protein GI | 119717043 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.906597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGG GGGTGAAGGT CCGGATCGCG GCGTTCCTGG TGCTCAGCGC CGTCGGCGTC
GTCTACGTCG CCGGCTCCTA CCTTGGGTTC GTCGACCGGA TCCTCGGCCG GGGCATCACC
GTGCACGCGA CGCTGCCCAC CTCGGGCGGC CTCTTCGAGG GCAGCGAGGT CACCTATCGC
GGCGTCAAGA TCGGGAAGGT CAGCGCCATG ACCGCGACCG CCGAAGGCGT CCGGCTCGAC
CTGGCCCTCG AGGAGGGCAC CCGGCTGCCC GCGGACTCCC CGATGTACGT GCACAACCTC
TCCGCGGTCG GCGAGCAGTA CCTCGACTTC GAGCCGGCCG ACGCCGCGGG CCCCTACGTC
GCGGCCGGCG ACACGCTGCA CGGCACCGCC GAATCGCTGC CCGTTGACGA GGGCGACCTG
CTGGTCGAGC TCGATCGGTT CGTGAGCTCG GTGGACAAGA AGGACCTCCA GGTCGTGGTC
CGCGAGCTCG GCGCGATGTT CACCGACACG GGCGTGCCCC TCCAACAGCT GATCGACAAC
GGCAGCGCGT TCGTGCGCGA GGCCGCGGCG CACACCGCCG ACACCATCCG GCTGCTCGAT
CACGGCAAGC GGGTGCTCAG CACCCAGCAG GGCCAGAGCG AGAACATCCG CGCGCTCGCC
GGGGACCTGC GCAGCCTCAC CGACGCCGTC GCTGCGAGCG ACGGCGACCT CGAGCACGTC
CTGGACGGCA CACCGGGCAC GGCGCGCGAG CTCGACGCCC TGCTCCGCGA CCTCGAGCCC
ACGCTGCCGG TGCTGCTCGG CAACGCGGTG AGCGTCAACC AGGTCGTGGT CTCCCACCTC
GCGGGCCTCG AGCAGCTGCT GGTGACCTAC CCCCGCACGA TCTCCGCGGG GTTCACCGGC
ACACCGGGCG ACGGCTACGG CCACGTGAAC CTGCAGTTCG ACAACTCGGT GCCGCCGTGC
ACCGAGGGCT ACAAGCCGCG CACCGAGTGG CGCCCGCCGA GCGACCTCAC CGACAGCCCG
ATCTACCCCG CCCGGTGCGC CAGCGGACCG CCGTACGTGA TGCGCGGCCC GAAGTACTCA
CCCGGCTCCT CCGGCAACCC CTCGCCCGGC CGGCTCTACC GCTCGTCGTA CGACCCGGTC
ACGGGTTTCG TGTCTGGAGC GGTCGACGCG GGCGGCAACC CCGTACGATT CCTCGATCAG
GGCAACCTGT CGATCCTGGA AGGGGACGCG TGGAAGTGGC TGCTGGTGGG GCCGGTGACC
AGCCGGTGA
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| Protein sequence | MSTGVKVRIA AFLVLSAVGV VYVAGSYLGF VDRILGRGIT VHATLPTSGG LFEGSEVTYR
GVKIGKVSAM TATAEGVRLD LALEEGTRLP ADSPMYVHNL SAVGEQYLDF EPADAAGPYV
AAGDTLHGTA ESLPVDEGDL LVELDRFVSS VDKKDLQVVV RELGAMFTDT GVPLQQLIDN
GSAFVREAAA HTADTIRLLD HGKRVLSTQQ GQSENIRALA GDLRSLTDAV AASDGDLEHV
LDGTPGTARE LDALLRDLEP TLPVLLGNAV SVNQVVVSHL AGLEQLLVTY PRTISAGFTG
TPGDGYGHVN LQFDNSVPPC TEGYKPRTEW RPPSDLTDSP IYPARCASGP PYVMRGPKYS
PGSSGNPSPG RLYRSSYDPV TGFVSGAVDA GGNPVRFLDQ GNLSILEGDA WKWLLVGPVT
SR
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