Gene Noca_2802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2802 
Symbol 
ID4596278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2972690 
End bp2974255 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content72% 
IMG OID639777407 
Productpeptide chain release factor 3 
Protein accessionYP_923991 
Protein GI119717026 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG4108] Peptide chain release factor RF-3 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCGACA CCCGCCCCCG CCGTACGTTC GCCGTCATCA GCCATCCCGA CGCTGGCAAG 
TCCACGCTCA CCGAGGCGCT CGCCCTCCAC GCGCGGGTGA TCACCGAGGC GGGTGCCGTC
CACGGCAAGG GGGAACGGCG GGCCACGGTC TCGGACTGGA TGGCGATGGA GAAGGCGCGC
GGCATCTCGA TCACCTCGGC CGCGCTGCAG TTCGTGTTCC GCGACCACGT GATCAACCTC
GTCGACACCC CCGGCCACAG CGACTTCTCC GAGGACACCT ACCGGGTGCT CTCCGCGGTC
GACTCGGCGG TGATGCTGGT CGACGCCGGC AAGGGCCTCG AGCCGCAGAC GCTCAAGCTG
TTCAAGGTCT GTGCGCTCCG CGGCATCCCG GTGATCACGG TCATCAACAA GTGGGACCGT
CCCGGCCTGT CGGCGCTGGG GCTGATGGAC CTGATCCAGG AGCGGATCAA GCTCCGCCCC
ACGCCGCTCA CCTGGCCCGT CGGCGAGGCC GGCGACTTCC GTGGCGTCGT GGACCGCCGC
ACCGGCGAGT TCGTGAAGTA CACGCGCACG GCGGGCGGCG CCACCCGCGC GCCGGAGCGA
CGGTTGGCCG CGCACCAGGT CGAGGAGACC GACGCGCGCT GCTGGGCGGC CGCGGTCGAG
GAGCACGAGC TGCTCACCCT GGACGGCGCG GACCACGACC AGCAGAAGTT CCTGGCCGGC
GAGACCACGC CGGTGGTCTT CGCCTCGGCG CTGCAGAACT TCGGCGTCGC GCAGCTGCTG
GAGCTGCTGC TCGACATCGC CCCGGGCCCC GGGCCCGCGG AGGGGGTCGA CGGTTCGGTG
CGCCGGGTCA CCGACGACTT CAGCGCGTTC GTCTTCAAGG TCCAGTCGGG CATGAACAGC
GCCCACCGCG ACCGGCTCGC CTACGCCCGG GTCGTCTCGG GCACGTTCGA GCGCGGCATG
GTCGTGACCC ACGCAGGCAC CGGTCGTCCC TTCCCGACCA AGTTCGCGCA GTCGGTCTTC
GGCCGCGAGA CGACCTCGGT CGAGACCGCC GAGGCCGGCG ACATCATCGG CTTCGTCAAC
GCCCAGGCGC TGCGCGTCGG CGACACCGTG TACGTCGGGG AGCGCGTCGA GTACCCACCC
GTCCCGAGCT TCGCGCCGGA GCACTTCGTC ACGGCGAGCG CGGGCGACAT CGGCCGCTTC
AAGCAGTTCC GCCGGGGCAT CGAGCAGCTG GACCAGGAGG GCGTCGTGCA GGTGCTGCGC
TCGGACCTGC GCGGTGACCA GAACCCGGTC CTGGCGGCCG TCGGACCGAT GCAGTTCGAG
GTCGTCGAGG ACCGGATGAC CAACGAGTTC AACGCGCCGA TCCGGTTCTC CCGGCTCGAC
TACCAGGTCG CCCGACGCAC CGATGCGGCG GGCGCCACGG CCCTGGCCGG GATGCGCGGC
GTCGAGGTGC TCGGGCGCAG CGACGGCACC CACCTGGCGC TGTTCGTCGA CCAGTGGCGC
GCGAACGTCA CCGCCCGGGA CAACCCGGAC GTCCTGCTCG AGGCGCTGCC GGCCGGCGGG
AGCTGA
 
Protein sequence
MSDTRPRRTF AVISHPDAGK STLTEALALH ARVITEAGAV HGKGERRATV SDWMAMEKAR 
GISITSAALQ FVFRDHVINL VDTPGHSDFS EDTYRVLSAV DSAVMLVDAG KGLEPQTLKL
FKVCALRGIP VITVINKWDR PGLSALGLMD LIQERIKLRP TPLTWPVGEA GDFRGVVDRR
TGEFVKYTRT AGGATRAPER RLAAHQVEET DARCWAAAVE EHELLTLDGA DHDQQKFLAG
ETTPVVFASA LQNFGVAQLL ELLLDIAPGP GPAEGVDGSV RRVTDDFSAF VFKVQSGMNS
AHRDRLAYAR VVSGTFERGM VVTHAGTGRP FPTKFAQSVF GRETTSVETA EAGDIIGFVN
AQALRVGDTV YVGERVEYPP VPSFAPEHFV TASAGDIGRF KQFRRGIEQL DQEGVVQVLR
SDLRGDQNPV LAAVGPMQFE VVEDRMTNEF NAPIRFSRLD YQVARRTDAA GATALAGMRG
VEVLGRSDGT HLALFVDQWR ANVTARDNPD VLLEALPAGG S